Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200606"

Accession numberr200606 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismBurkholderia xenovorans LB400 [details]

Sequence

VariantLB400
GenBank IDsNC_007951.1
SequenceDNA of 1105 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 82)
DescriptionRF2 ORF0: 2e-07 ORF1: 2.7e-256
ATGGAAGCGG AACGTCTCAA CGCGATCGAA GCCTCACTGG CGGACCTGCG CACTCGCGCA AGCGCGCTAC GGGGGTATCT TTGACTACGA CGACAAAGCA CTGCGTCTAA TCGAAGTCAA CCGGGAACTC GAAGACCCGG ACGTCTGGAA CGACTCGAAG CACGCCCAGG CCCTCGGCCG GGAAAAGAAG CTGCTCGACG ACACGGTCGG CAAACTCACG TCGCTCGATA ACGACCTGCG CGATGCGCAG GACCTGTTCG AAATGGCCCG CGAAGAAGGC GACGAGGAAA CTCTCCTCGC CTGCGAATCC GACGCGCAAG GCATCGAACA GCGCGTGGCG GACATGGAAT TCCGCCGCAT GTTCGCGAAC CCGGCCGATC CGAACAATGC GTTCCTGGAC ATCCAGGCCG GCGCCGGCGG CACCGAAGCG TGCGACTGGG CGGCCATGCT GCTGCGCCAA TACCTGCGCT ACTGCGAGCG CAAGGGCTTC AAGACCGAAG TGCTGGAACA GACCGACGGC GACGTCGCGG GCATCAAGAA CGCCACGATC AAGATCGAAG GCGAATACGC GTATGGCTTT CTGCGCACCG AGACCGGCGT GCACCGCCTC GTGCGCAAGT CGCCGTTCGA CTCGTCGGGC GGCCGCCACA CGTCGTTCTC CTCGGTGTTC GTGTACCCGG AAATCGACGA CTCGATCGAA GTGGACATCA ACCCGGCCGA TCTGCGCATC GACACGTACC GCGCGTCCGG CGCGGGCGGT CAGCACATCA ACAAGACCGA CTCCGCGGTG CGTATCACGC ACTTGCCGTC GGGCATCGTC GTGCAGTGCC AGAACGACCG TTCGCAGCAC CGCAACCGCG CCGAAGCGAT GGCCATGCTG AAATCGCGCC TGTACGAGGC GGAAATCCGC AAGCGTCAGG CCGAGCAGGA CAAGCTCGAA GCCGGCAAGA CCGACGTGGG CTGGGGTCAT CAGATCCGCT CGTACGTGCT GGACAACAGC CGTATCAAGG ATCTGCGCAC GAACGTCGAA ATCAGCAATA CCAAGAGCGT GCTCGACGGC GACCTCGATC CGTTCATCAG CGCCAGCCTG AAACAGGGCG TCTGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications81..83:ribosomal_frameshift
MEAERLNAIE ASLADLRTRA SALRGYLDYD DKALRLIEVN RELEDPDVWN DSKHAQALGR EKKLLDDTVG KLTSLDNDLR DAQDLFEMAR EEGDEETLLA CESDAQGIEQ RVADMEFRRM FANPADPNNA FLDIQAGAGG TEACDWAAML LRQYLRYCER KGFKTEVLEQ TDGDVAGIKN ATIKIEGEYA YGFLRTETGV HRLVRKSPFD SSGGRHTSFS SVFVYPEIDD SIEVDINPAD LRIDTYRASG AGGQHINKTD SAVRITHLPS GIVVQCQNDR SQHRNRAEAM AMLKSRLYEA EIRKRQAEQD KLEAGKTDVG WGHQIRSYVL DNSRIKDLRT NVEISNTKSV LDGDLDPFIS ASLKQGV

Publication