Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200610"

Accession numberr200610 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCarboxydothermus hydrogenoformans Z-2901 [details]

Sequence

VariantZ-2901
GenBank IDsNC_007503.1
SequenceDNA of 1117 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 0.0018 ORF1: 6.2e-214
ATGTTAATTG AGCTGAAAAG AAGTTTGGCG GAGATTTCCC CCAAGATTGA GGAAATGAGG GTTTCTCTTT GACATTCCCG GGAAAAAGGA ACTGGTGGAA AAACTTACGG CCAAAACCTA CGAGCCTGAC TTCTGGGATA ATTACACAGA AGCCCAGAAA ACTCTAAAAG AATTAAACCG CCTCAAAGAT GACATTGAAA AGTATGAAGA ACTTTTAAAA GCGCAGGAAG AGCTTACCGT TTTATTGCAA CTTTTGGAAG AGGAAGAAAA TGAGGAGTTA GCCGTTGAGG CTCAGGACAA AGCCAAAAAA TTAATGGAAA AACTCCACCG GATGGAAATA GAGCTTTTGC TATCGGGGCC ATATGATAAA AATTCGGCAA TAGTTTCCCT CCATGCGGGA GCGGGAGGTA CGGAGGCCCA GGACTGGGTG GAAATGCTTT ACCGGATGTA TACCCGCTGG GCCGAAGATA AAGGGTATAA AGTGGAACTA ATCGACCGGC TTTTAGGGGA AGAGGCGGGC TTAAAAAGCG TTACTTTTAG CGTGGAGGGG TTTGGCGCTT ACGGTTATTT GAAAGCCGAG CGGGGAGTGC ACCGCTTAAT TCGGATTTCT CCCTTTGATT TTTCCGGCCG GCGACATACT TCCTTTGCTT CGGTGGATGT CCTGCCGGAG GTAGCGGAAG ATATTCCGGA AATTGAATTA AAGGAAGAAG AGTTAAAAAT AGAAACGTTT CGGTCGGGAG GAGCCGGGGG ACAGCATGTC AATAAAACCG AATCGGCGGT GCGGATTACC CACCTGCCTA CGGGCATAAC GGTGGTTTGC CAGAACGAGC GCTCCCAGTT AATGAACCGG GCGTTAGCGG AAAAACTATT AAAAGCCAAG CTTTTGGATC TGGAAATGAA GAAAAAGGAA GAAGAAATGG CCAAACTTCG GGGGGAGCAG AAGGAGATTG CCTGGGGCAG TCAGATAAGA ACTTACGTTT TTCATCCCTA TAGCCTGGTT AAAGACCACC GCACCGGCGT TGAAGTAGGG GATGTCCAGG GGGTCATGGA TGGCGAAATT GACATTTTTA TCGAAGCTTA TCTTAAAATG CTGGTGACAC AGGGAGGAAA CCAATGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MLIELKRSLA EISPKIEEMR VSLDIPGKKE LVEKLTAKTY EPDFWDNYTE AQKTLKELNR LKDDIEKYEE LLKAQEELTV LLQLLEEEEN EELAVEAQDK AKKLMEKLHR MEIELLLSGP YDKNSAIVSL HAGAGGTEAQ DWVEMLYRMY TRWAEDKGYK VELIDRLLGE EAGLKSVTFS VEGFGAYGYL KAERGVHRLI RISPFDFSGR RHTSFASVDV LPEVAEDIPE IELKEEELKI ETFRSGGAGG QHVNKTESAV RITHLPTGIT VVCQNERSQL MNRALAEKLL KAKLLDLEMK KKEEEMAKLR GEQKEIAWGS QIRTYVFHPY SLVKDHRTGV EVGDVQGVMD GEIDIFIEAY LKMLVTQGGN Q

Publication