Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200621"

Accession numberr200621 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismChlamydophila pneumoniae TW-183 [details]

Sequence

VariantTW-183
GenBank IDsNC_005043.1
SequenceDNA of 1108 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 0.0016 ORF1: 8.8e-230
ATGCAGGAAA ATTTAGACAA GCGTTTGGAA GCACTTCGCA CGGAAATATC TTTAGCTGCG AGGTCTCTTT GACCTCGATA AAAAACAAAA AGAACTTCAA GTTTTAGAAG AAGAAAGTTC CGAAGAAAAT TTTTGGCAAG ACAGTGTTCA TGCTGGAAAA ATTTCTGAAC AGATTGTAAG TCTGAGACGA CAAATCCAAG AGTATCAGGA ATTAAAAAGC AAAATAGATG CTATAGAGTT TTTCCTCGAG GATGCCGATG CTCTTGAAGA CCCTGCGATT TGTGAAGACT TAGAGAAAGA ATTTCTCTTT TGTGAGAAGA AACTTGCTGT TTGGGAGACG CAACGGTTGC TTTCCGGAGA GGCAGACAAG AACTCTTGTT TCCTTACGAT CAATGCTGGG GCAGGTGGGA CGGAGTCGTG TGATTGGGTA GAGATGCTGT TTCGTATGTA TTCCCGATGG GCGACGAAAC ATCAATGGGC CTTAGAGGTT GTCGATCGCT TAGATGGTGA AGTTGTTGGA ATTAAGCATG TTACTGTAAA GTTTTCAGGA ATGTATGCTT ATGGGTATGC CAAGGCAGAG CGAGGAGTAC ATCGTTTGGT GCGTATCTCA CCTTTCGATA GTAATGGGAA ACGTCACACT AGCTTTGCTT CTGTAGACGT CTTCCCTGAG ATTGATGATC AGATTAAGAT TGAGATACGA CCTAATGATT TACGTATAGA TACGTTTCGT TCTTCGGGAG CAGGAGGACA ACACGTCAAC GTTACGGAAT CCGCAGTCAG GATCACGCAC CTACCTTCTG GAGTCGTTGT TTCATGTCAA AATGAACGTA GTCAGATACA GAATCGTGAG AGCTGTATGA AAATGCTACA AGCAAAGTTG TATCAGCAGG TTTTACAAGA ACGTTTAGAG AAGCAATCTC TTGATCGCAA AGATAAAAAG GAAATTGCTT GGGGATCTCA AATTCGCAAC TACGTATTTC AGCCCTATAC TCTTGTTAAA GATGTACGTA CGGGACATGA AACAGGAAAT GTCCAAGCGA TGCTCGACGG CGAGCTATTG GATGAATTTA TTAAAGCATA TTTGGCAGAG TTTGGAGAAG TTTCATGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MQENLDKRLE ALRTEISLAA RSLDLDKKQK ELQVLEEESS EENFWQDSVH AGKISEQIVS LRRQIQEYQE LKSKIDAIEF FLEDADALED PAICEDLEKE FLFCEKKLAV WETQRLLSGE ADKNSCFLTI NAGAGGTESC DWVEMLFRMY SRWATKHQWA LEVVDRLDGE VVGIKHVTVK FSGMYAYGYA KAERGVHRLV RISPFDSNGK RHTSFASVDV FPEIDDQIKI EIRPNDLRID TFRSSGAGGQ HVNVTESAVR ITHLPSGVVV SCQNERSQIQ NRESCMKMLQ AKLYQQVLQE RLEKQSLDRK DKKEIAWGSQ IRNYVFQPYT LVKDVRTGHE TGNVQAMLDG ELLDEFIKAY LAEFGEVS

Publication