Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200626"

Accession numberr200626 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium acetobutylicum ATCC 824 [details]

Sequence

VariantATCC 824
GenBank IDsNC_003030.1
SequenceDNA of 1141 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 106)
DescriptionRF2 ORF0: 0.017 ORF1: 6.3e-225
ATGTTTAAAA CTGAGAGGGT GATTTTTTTG CTAATAAAGA TTGAAGAAGC AGCTTCTTTA ATAAAAGAAA TAGAAATTAA GGCAAGAGAA ATGAGGGCTT CTCTTTGACT TCGATAAAAG TAGAAGTAGA ATAGATGAAC TTGAAAGAGA TATGCAGGAG CCTGATTTTT GGAATGATGT AAAAAGAGCA CAAGAAATAA GCATGGAGAT AAAATTTCTT AAAGGAAGAA TTGATAGATT TAATTCTATT GAAAGCAGAA TTGAAGATGA TAATGTACTT ATAGAAATGT GCAGAGAAGA TGAAAATGAA GAAGAAGCGG ATGAGATACT AAAGGAAGTT CGTGACTTAC ATGAAGAGGT AGATAATTTT AAGATAGAAA TAATTCTTTC AGGAGAATAT GATAGAAATA ATGCTATTTT GAATCTTCAT ACAGGCGTTG GAGGTACCGA TGCACAGGAT TGGACACAAA TGCTTTTGAG GATGTATACA AGATGGGCGG AAGCTAAAGG GTTCAAGGTA GACATAATTG ATATGCTCCC AGGAGATGAA GCAGGTATAA AAAGTGTAAG TATAAATATT GATGGAGAAT TTGCTTATGG ATATTTAAAG GCTGAAAAAG GGATACATAG ATTGGTCAGA ATTTCACCCT TTAATGCAAA TGGTAAAAGA CAAACTTCTT TTGCATCTGT TGAAGTACTT CCACAATTAA CTCAAAGCCA AGATATAGTT ATACGACCTG AAGATTTAAA AGTGGATACT TATAGGGCCA GTGGAGCAGG TGGTCAGCAT GTAAATAAAA CAGAATCAGC AGTAAGAATA ACCCATCTTC CAACGGGAAT AGTTGTACAA TGTCAGTCTG AAAGAAGTCA GCATTCTAAT AAGGAAACTG CTATGAACAT GTTAAAATCA AAGCTTGTTG AGTTAAAAGA AAGAATGCAT AAGGAAAAGG TAGAAGACTT AGCAGGAGAA CTTAAGGATA TGGGATGGGG AAATCAAATA AGGTCATATG TATTTCAACC ATACACAATG GTTAAGGATC ATAGGACTGG TGTAGAGACT TCAAATGTAG ATGCTGTTAT GGATGGAGAA ATTGATAAAT TTATAATAGA GTACTTAAAT AAGGAAAACA GCCAGAAATA A

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications105..107:ribosomal_frameshift
MFKTERVIFL LIKIEEAASL IKEIEIKARE MRASLDFDKS RSRIDELERD MQEPDFWNDV KRAQEISMEI KFLKGRIDRF NSIESRIEDD NVLIEMCRED ENEEEADEIL KEVRDLHEEV DNFKIEIILS GEYDRNNAIL NLHTGVGGTD AQDWTQMLLR MYTRWAEAKG FKVDIIDMLP GDEAGIKSVS INIDGEFAYG YLKAEKGIHR LVRISPFNAN GKRQTSFASV EVLPQLTQSQ DIVIRPEDLK VDTYRASGAG GQHVNKTESA VRITHLPTGI VVQCQSERSQ HSNKETAMNM LKSKLVELKE RMHKEKVEDL AGELKDMGWG NQIRSYVFQP YTMVKDHRTG VETSNVDAVM DGEIDKFIIE YLNKENSQK

Publication