Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200627"

Accession numberr200627 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium perfringens str. 13 [details]

Sequence

Variant13
GenBank IDsNC_003366.1
SequenceDNA of 1090 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 0.0017 ORF1: 2.8e-232
ATGGAACTTG AAAATCAATT ATCAAAGTTA CATGAACTAA AAAATAATTT AAAGGAAATG GGGGCTTCAC TTTGACTTAG CATCTTTAGA GAAGAAGAGT GCAGAATTAG AGCTTAAGAT GCAAGAAGCG GGATTTTGGG ATGATGTCCA AAAGGCCCAA GAAGTAACCC AAGAAGCAAA AAGAGTAAAA GATAAAATTG ATAAGTTTAG AAATTTAAAT GAAAGAATAG ATGATGTAGA AGTATTAAAA GAGCTTATGG AAGAAAATGA CGAGGAAACA GCTAAGGAGA TAATAAGCGA AGTTAAGGCT TTAAGTAAAG AGATAGATAC ATTAAAAATA GAGACAATTC TTTCTGGGGA ATATGATAGA AATGATGCCA TATTAACACT TCATACAGGT GTTGGTGGAA GCGATGCTAA TGATTGGACA GAAATGCTTC TTAGAATGTA CACAAGATGG TGTGAAAAGA AGGGATATTC CTTAGAAACT ATTGATTATT TACCTGGAGA TGAAGCTGGA GTTAAAAGTG TTACTTTAAA AGTTAAAGGT GAATTTGCTT ATGGATATTT AAAAGCTGAA AAGGGTATTC ACAGATTAGT TAGAATATCA CCTTTTAATG CTAATGGTAA AAGACAAACT TCCTTTGCTT CAGTAGAAGT TTTACCAGAG TTAACATCTG ATCAAGATAT AGAAATAAAT CCTGTAGACT TAAGAATAGA CACTTATAGA GCAGGAGGAG CTGGTGGTCA GCATGTAAAT AAAACTGAGT CAGCAGTAAG AATTACTCAT ATTCCAACTG GAATAGTAGT TCAATGCCAA AATGAGAGAA GTCAGTTTTC TAATAGAGAT ACTGCTATGG GAATGTTAAA GTCTAAACTT ATAGAACTTA AAGAGAGAGC TCATAAGGAA AAAATAGAGG ATTTAACAGG TGAATTAAAA GATATGGGAT GGGGAAGTCA GATAAGAAGT TATGTTTTTC ATCCATATTC AATGGTTAAG GATCATAGAA CTAATGTTGA GACATCTAAT GTGAACGGAG TAATGGATGG AGATATAGAT AATTTTATAA TTGCCTATTT AAATTCATAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MELENQLSKL HELKNNLKEM GASLDLASLE KKSAELELKM QEAGFWDDVQ KAQEVTQEAK RVKDKIDKFR NLNERIDDVE VLKELMEEND EETAKEIISE VKALSKEIDT LKIETILSGE YDRNDAILTL HTGVGGSDAN DWTEMLLRMY TRWCEKKGYS LETIDYLPGD EAGVKSVTLK VKGEFAYGYL KAEKGIHRLV RISPFNANGK RQTSFASVEV LPELTSDQDI EINPVDLRID TYRAGGAGGQ HVNKTESAVR ITHIPTGIVV QCQNERSQFS NRDTAMGMLK SKLIELKERA HKEKIEDLTG ELKDMGWGSQ IRSYVFHPYS MVKDHRTNVE TSNVNGVMDG DIDNFIIAYL NS

Publication