Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200640"

Accession numberr200640 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismEhrlichia ruminantium str. Welgevonden [details]

Sequence

VariantWelgevonden
GenBank IDsNC_005295.2,NC_006832.1
SequenceDNA of 1105 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 2.9e-05 ORF1: 4.7e-218
ATGGTAACTA AATCTTATAT TGACGAAGAA TTAGTAAACT TAAATAAAGC TTTACAACTA ATTCGAGGTT ACCTTTGACA TTGATAATCT GACAAGCTTA TTAGTTGATC TTAATACAAA GTGTGCTGAT ACGTCTTTAT GGAATGATAA TTTAACAGCA CATCATGTTT TATCTGAACG TGCTAGAATA TCTAAGATCG TAGGTTTATT TACAGAATTA GAAGAAGAAT ATCAGTATTA CAATGAACTA CTTTCTGTCA TAAGTAATGA TAGCGATAGC CTACTTGATG ATTTATCTAA AGGCTTAGAA GCATTAAAAG AAAAAGTCAA AAAAAAAGAA GTTGAATGTT TGTTTTCTGA TGAAGCAGAT CAAAACGATT GTTTTATAGA AATTCAATCT GGTGCTGGTG GTACAGAAAG TAATGATTGG TCTAATATGC TCTTACGAAT GTACATAAGG TGGGCAGAAA TATATCATAA TTTTAAAACA CAAGTTGTGT ATAAGTTAGA CGGTGAAGAA ACTGGTGTAA AATCTGCCAT TATTAAAGTT ATAGGATACA ATGCATATGG ATGGTCAAAA ACCGAAAGTG GTATTCACAG ATTAGTACGT ATATCACCAT TTAATTCAAA TGCAAAGCGT CATACTACAT TTGCAAGTGT ATTAGTATCT CCAGTTACAA ATGAGAATTT TGATATTCAA ATTCACGATA AAGATCTACG TATAGATACA TATAGAGCAT CTGGAGCAGG TGGACAACAC GTCAACAAAA CAGAAAGTGC TGTTCGTATT ACACACATTC CATCAGGAAT CGTAGTTCAA TGTCAAAATA ATAGATCTCA ACATCAAAAT TTGGGTGAAG CATACAACTT GTTAAGAAGC AGATTGTATC AATTAAAATT ACAAGAGAAA GAAAAAAAAA TGGCACAAGA ACATAGCCAA AGATGTGATA TAGGATGGGG AAACCAAATT AGGTCATATG TCATGCACCC ATATCAAATG GTAAAAGATA TACGTACAGG ATATGAAACT GGTAATGTCA ACTCAGTACT AGATGGAGAC TTAGATGCGT TTATTATAGC AACATTAACA AAAAAAATTA CATAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MVTKSYIDEE LVNLNKALQL IRGYLDIDNL TSLLVDLNTK CADTSLWNDN LTAHHVLSER ARISKIVGLF TELEEEYQYY NELLSVISND SDSLLDDLSK GLEALKEKVK KKEVECLFSD EADQNDCFIE IQSGAGGTES NDWSNMLLRM YIRWAEIYHN FKTQVVYKLD GEETGVKSAI IKVIGYNAYG WSKTESGIHR LVRISPFNSN AKRHTTFASV LVSPVTNENF DIQIHDKDLR IDTYRASGAG GQHVNKTESA VRITHIPSGI VVQCQNNRSQ HQNLGEAYNL LRSRLYQLKL QEKEKKMAQE HSQRCDIGWG NQIRSYVMHP YQMVKDIRTG YETGNVNSVL DGDLDAFIIA TLTKKIT

Publication