Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200652"

Accession numberr200652 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismGeobacter metallireducens GS-15 [details]

Sequence

VariantGS-15
GenBank IDsNC_007517.1
SequenceDNA of 1120 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 1.5e-06 ORF1: 1.4e-247
ATGTTCAGAG AAGAAGTAGC CCGCGTTGAA AATCTTTCGG AGCGCATCGC CAAGCTCCGG GGGTCTCTTT GACATAGACA GCAAGCGGGA GGATATCCAG GAGATGGAGG CCCATATCGC GGCCCCCGGC TTCTGGGATG ACAACGAGAA GGCCCAGCAA CTCCTCAGGG AACGGACGCG GATCGAGAAG ATCCTGGAGC TCTGGGACCG TCTGACCCGT CAGGCCGACG ATATCCGGGT GCTGATCGAG CTGGGCGAGG AGGCCGGGGA CGAGGGAACC CTCGACGAGG TCCGGGCACT CAATGACCAG CTGGAAAAGG ATGTGGAGGG GGCCGAGTTC CAGCGGATGC TCTCGGGCAC CCACGACAAG AACGCCTGCT ACTTTTCCAT CAACGCCGGC GCAGGGGGTA CCGAGGCCCA GGACTGGGCC GAGATGCTGC TCAGGATGTA TCTCCGCTAC TGCGAGCGCA AGGGGTGGAA AACGGAGATC ACCGACTATC AGGGCGGCGA CGAGGCTGGG GTCAAGTCGG CCACCTTTAC CGTTGACGGT GAGTATGCAT ACGGCTATCT TAAGGCCGAA GCCGGCATCC ACCGCCTCGT GCGGATTTCT CCTTTCGATT CCAATGCCCG GCGACATACC TCCTTCGCCT CGGTCTTCGC CTTCCCCGAG ATCGAGGACG ATATCGAGGT AACGATCAAC GAAGCAGATC TGAGAATCGA CACCTACCGC TCCAGCGGGG CCGGCGGCCA GCACGTGAAT ACTACCGATT CAGCCGTCCG GATCACCCAT ATCCCCACGG GCCTCGTGGC TGCCAGCCAG TGCGAGCGGA GCCAGCACAT GAACAAGGCG ACCGCCATGA AGATGCTCCG GGCCAAGCTC TACGAGAAGG AGCTTCAGGA GCGGGAGGCC AAGGCCGCCG AGATCGGCGG TGAGAAGAAG GAGATCGGCT GGGGAAGCCA GATTCGCTCC TATGTCCTTC ATCCCTACAA GATGGTGAAG GATCTGAGGA CCGGCGTTGA AACCGGCAAC CCCGACGCGG TTCTGGACGG CGATCTCGAG GAGTTCATCG TCGCCTTCCT CATGGGGGTA CGCCGGGACG TTAAGGACAC CGTAGACTGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MFREEVARVE NLSERIAKLR GSLDIDSKRE DIQEMEAHIA APGFWDDNEK AQQLLRERTR IEKILELWDR LTRQADDIRV LIELGEEAGD EGTLDEVRAL NDQLEKDVEG AEFQRMLSGT HDKNACYFSI NAGAGGTEAQ DWAEMLLRMY LRYCERKGWK TEITDYQGGD EAGVKSATFT VDGEYAYGYL KAEAGIHRLV RISPFDSNAR RHTSFASVFA FPEIEDDIEV TINEADLRID TYRSSGAGGQ HVNTTDSAVR ITHIPTGLVA ASQCERSQHM NKATAMKMLR AKLYEKELQE REAKAAEIGG EKKEIGWGSQ IRSYVLHPYK MVKDLRTGVE TGNPDAVLDG DLEEFIVAFL MGVRRDVKDT VD

Publication