Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200653"

Accession numberr200653 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismGeobacter sulfurreducens PCA [details]

Sequence

VariantPCA
GenBank IDsNC_002939.4
SequenceDNA of 1120 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 0.00012 ORF1: 9.2e-251
ATGTTCAGAG AAGAAGTTGC ACGGGTCGAA AATTTCGGGG AGCGGATTGC CAAGCTCCGG GGGTCTCTTT GACATAGACA GCAAGCGGGA AGACATCCAG GAACTGGAAG CGCAGATCGC CGCTCCCGGC TTCTGGGACA ATAACGAGGA AGCCCAGAAG GTCCTGCGGG AGAGAACCCG CATCGAAAAA CTCATAGACC TGTGGGATCG CCTCAACCGC CAGGCGGACG ACATCCGCGT CCTCATCGAA TTGGGAGAGG AAGCCCAGGA CGAGGCCACA CTCGACGAAG TCCGCGCCCT CAACGACAGC CTTGAGCGCG AAGTGGAAGG GGCCGAATTC CAGCGCATGT TGTCGGGCCC CCACGACAAG AACAGCTGTT TCGTTTCCAT CAATGCCGGC GCCGGCGGAA CCGAGGCCCA GGACTGGGCC GAGATGCTGC TCAGGATGTA CCTGCGCTAC TGCGAGCGCA AGGGCTGGAA GACCGAAATC ACCGACTTCC AGGCGGGAGA CGAGGCCGGG GTGAAGTCGG CGACCTTTAC GGTTGACGGT GAGTACGCAT ACGGCTATCT TAAGGCCGAG GCCGGGATTC ACCGCCTCGT GCGGATTTCC CCCTTCGACA GCAACGCCCG CCGGCATACC TCCTTTGCCT CGGTGTTCGT CTTCCCCGAA ATCGAGGACG ACATCGAGAT CAAGATTGCC GAGTCGGATC TGCGGGTCGA TACCTACCGT TCCAGTGGCG CCGGCGGTCA ACACGTAAAC ACCACCGACT CCGCCGTCCG GCTTACTCAC CTTCCCACGG GCATCGTGGT CGCCTGCCAG TGCGAGCGAA GCCAGCACCT GAACAAAGCC ACGGCGCTGC GGATGCTCCG GGCGAAACTC TACGAAAAGG AGCTCCAGGA GCGCGAAGTC CAGGCCTCCG AACTGGCCGG CGAGAAAAAG GATATCGGCT GGGGAAGCCA GATCCGCTCC TATGTGCTCC ACCCCTATAA GATGGTCAAG GATCTGCGGA CCGGCGTCGA ATCGGGCAAC CCCGACGCGG TCCTGGACGG TGCACTGGAG GATTTCGTTG TAGCGTTCCT CATGGGGGTG CGGCGCGATG TGAAAGACTC CGACGAGTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MFREEVARVE NFGERIAKLR GSLDIDSKRE DIQELEAQIA APGFWDNNEE AQKVLRERTR IEKLIDLWDR LNRQADDIRV LIELGEEAQD EATLDEVRAL NDSLEREVEG AEFQRMLSGP HDKNSCFVSI NAGAGGTEAQ DWAEMLLRMY LRYCERKGWK TEITDFQAGD EAGVKSATFT VDGEYAYGYL KAEAGIHRLV RISPFDSNAR RHTSFASVFV FPEIEDDIEI KIAESDLRVD TYRSSGAGGQ HVNTTDSAVR LTHLPTGIVV ACQCERSQHL NKATALRMLR AKLYEKELQE REVQASELAG EKKDIGWGSQ IRSYVLHPYK MVKDLRTGVE SGNPDAVLDG ALEDFVVAFL MGVRRDVKDS DE

Publication