Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200659"

Accession numberr200659 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismHahella chejuensis KCTC 2396 [details]

Sequence

VariantKCTC 2396
GenBank IDsNC_007645.1
SequenceDNA of 1099 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 2e-09 ORF1: 3.5e-267
ATGTTAGAAG TGAATCCAAT AGTTAATACC ATCAAGGACT TGCGCTCCCG CGTAGAATCT TTGCGGAGGT ATCTTTGACT ACGACGTCAA GAAAGAGCGT CTGGTTGAAG TAGAAAGGGA GCTCGAAGAT CCCGGCGTCT GGAATAATCC AGAACGTGCG CAAGGTCTTG GCAAAGAGCG TTCCTCCCTT GAGGTGGTGG TGAAAACCGT CGATGACGTG ACCGGCGGAT TGACGGATTG TTCCGACCTG CTGGATATGG CGGTGGAAGA GCAGGACGCG GATGCTGTCA CTGAAGTGGA AACTGAATTG GAATCAATCC GCGCACAGGT GGAGACCCTG GAGTTCCGTC GGATGTTTGC GGGAGAAATG GATCCCAATA ACGCCTACTT GGATATCCAG GCGGGTTCCG GCGGCACCGA AGCGCAGGAT TGGGCGAGTA TATTGCTGCG TATGTATCTG CGTTGGGGCG AGCGTCGTGG ATTCAAAACT GACTTGATCG AGGAATCTCC CGGTGAAGTA GCCGGCATTA AAAGCGCCAC GATTCATTTC CAGGGTGAAT ACGCTTATGG GTGGCTGCGC ACGGAAACGG GCGTACACCG GCTGGTGCGG AAGTCTCCGT TTGACTCCGG CAACCGTCGT CATACTTCTT TTGCGTCCGT GTTTGTTTCC CCGGAAGTGG ATGACGATAT CGAAATCGAT ATCAATCCCG CCGATTTGCG CATAGACGTT TATCGCGCAT CAGGCGCCGG CGGTCAGCAC GTTAACCGGA CCGAATCCGC CGTACGTATC ACGCACATGC CCTCCGGCAT CGTGACGCAG TGCCAGAACG ATCGTTCTCA GCACAAAAAC AAAGATCAGG CGATGAAGCA GCTGAAAGCG AAGCTGTATG AGCTTGAAAT ACAAAAGCGC AATGCTGAAG CGCAACAGCT GGAAGATAGT AAGTCCGATA TCGGTTGGGG CAGCCAGATT CGATCTTACG TATTGGACCA GTCGCGTATC AAAGATTTGC GTACTTCAAT AGAAAACTCC AATTGTCAGG CGGTGCTTGA CGGCGATATT GATGAGTTTA TCGAGGCGAG TTTGAAGCAG GGCCTGTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MLEVNPIVNT IKDLRSRVES LRRYLDYDVK KERLVEVERE LEDPGVWNNP ERAQGLGKER SSLEVVVKTV DDVTGGLTDC SDLLDMAVEE QDADAVTEVE TELESIRAQV ETLEFRRMFA GEMDPNNAYL DIQAGSGGTE AQDWASILLR MYLRWGERRG FKTDLIEESP GEVAGIKSAT IHFQGEYAYG WLRTETGVHR LVRKSPFDSG NRRHTSFASV FVSPEVDDDI EIDINPADLR IDVYRASGAG GQHVNRTESA VRITHMPSGI VTQCQNDRSQ HKNKDQAMKQ LKAKLYELEI QKRNAEAQQL EDSKSDIGWG SQIRSYVLDQ SRIKDLRTSI ENSNCQAVLD GDIDEFIEAS LKQGL

Publication