Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200661"

Accession numberr200661 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismLactobacillus acidophilus NCFM [details]

Sequence

VariantNCFM
GenBank IDsNC_006814.3
SequenceDNA of 1117 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 1.5e-09 ORF1: 3e-238
ATGGAAATTA GTGAAATTCA AAATGTATTA GATGAGTTGA AGAAACGTTT AGACCACTTT AGGGGGTCTC TTTGACTTAG ATGGTATTAA TGAAAGTATT GAAATAAATG AAGCTAAAAT GGCTCAGCCA GATTTTTGGG ATAATCAAGA AAAAGCTCAA AAACTAATTA GTGAAAACAA TGTTTTAAAG GAAAAAAGAG ACTCATTCTT AAAATTAAGC GAAGATTATG AAAATGAGTT AACTGCACTC GATTTGCTGC GTGAAGAGCC AGATTCAGAT TTACAAACAG AAGTTGAAAC AGATTTAATA GCTTTACAGG AAGCTTTTCA TAATTATGAA TTAGATTTAC TTTTGTCTGG CAAATATGAT AGTCATAACG CATTATTTGA AATACATCCT GGTGCAGGTG GTACTGAAGC AATGGACTGG GGACAAATGC TCCTTAGAAT GTATCAGCGC TATTGTGATA CAGCAGGTTT TAAATTTGAA ATAAATGATT ATGAACCAGG AGAAGAAGCA GGAGTAAAAA GTGTTACTGC TAGAGTAGTC GGCCATAATG CTTATGGAAT GCTAAAGTCG GAAAATGGTG TTCATCGCTT GGTTAGAATT TCACCATTTG ACTCTGCCAA GAGACGGCAT ACTTCTTTTG CATCAGTTGA AGTAATTCCG GAGATTGATG ATAGTATCAA AATTGATATC GATCCTAAGG ATTTAAGAAT CGATGTATAT CGGTCAAGTG GTGCAGGTGG ACAACACATT AATAAAACAT CAAGTGCTGT AAGAATTACG CACTTACCGA CTGGAATAGT CACTACATCA CAGGCTCAAC GCTCACAGAT TCAAAACCGT GAGACTGCAA TGAATGAGTT GCGGGCTAAG CTATTTCATT TAGAAGAAGA AAAAAAGCGC AAGCAAAAGC AGGCTTTGAA AGGTGATCAA AAAGAAATTG GTTGGGGTTC ACAAATTAGA TCATATGTAT TTCATCCGTA CAATTTAGTT AAAGACCTTA GAACTGGATA CGAAACAGCT GATACAACTG GTGTAATGGA TGGGAAACTT CAACCATTTA TTTATTCGTA TTTGCAATGG TTGCTTAGTC AGGAAAATCC AGAATAG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MEISEIQNVL DELKKRLDHF RGSLDLDGIN ESIEINEAKM AQPDFWDNQE KAQKLISENN VLKEKRDSFL KLSEDYENEL TALDLLREEP DSDLQTEVET DLIALQEAFH NYELDLLLSG KYDSHNALFE IHPGAGGTEA MDWGQMLLRM YQRYCDTAGF KFEINDYEPG EEAGVKSVTA RVVGHNAYGM LKSENGVHRL VRISPFDSAK RRHTSFASVE VIPEIDDSIK IDIDPKDLRI DVYRSSGAGG QHINKTSSAV RITHLPTGIV TTSQAQRSQI QNRETAMNEL RAKLFHLEEE KKRKQKQALK GDQKEIGWGS QIRSYVFHPY NLVKDLRTGY ETADTTGVMD GKLQPFIYSY LQWLLSQENP E

Publication