Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200663"

Accession numberr200663 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismLactobacillus plantarum WCFS1 [details]

Sequence

VariantWCFS
GenBank IDsNC_004567.1
SequenceDNA of 1117 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 2.8e-06 ORF1: 2.6e-257
GTGGAATTAA GTGAATATAA ACACCTGATT GAAGAAATGC AAAGTGCTGT CGACGACTTT AGGGGGTCGC TTTGACTTAG ATGCTTTGAA CGAAAGCATT CAAGAAAATG AAGCTCGAAT GGCCGAACCC GGTTTTTGGG ACGACCAGGC TGCCGCCCAG AAAGTCATCG ATGAGAATAA CGTGTTGAAA GGAAAGTATG ATACGTTTAA GCAATTAGCT GATGAAGTCG GTGACTTGGC AGTCGCTTAT GAGTTACTGA GTGAGGAACC CGATGCTGAG ATGCAGGCTG AGTTTGAAAC GGACTTTCAG CACGCTGAAC ATGATTTACA ACAGTACCGG CTCAACTTAC TTTTGGACGG TCCGTACGAC CGCAATAACG CTATTTTAGA AATCCATCCT GGAGCTGGTG GGACCGAATC CCAAGATTGG GGTGCGATGC TACTAAGAAT GTACACGCGC TGGGCTGCGA GTCACAATTT CAAAGTCGAG ACTGTTGACT ACCAAGCTGG TGATGAGGCA GGCATTAAGA GTGTGACTTT ATTAATTAGC GGCCACAATG CTTACGGTTA TTTGCGGTCA GAAAAAGGGG TTCATCGTCT TGTTCGGATT TCGCCGTTCG ATGCGGCTGG TCGGCGCCAC ACATCTTTTG CGAGTGTTGA TGTGATGCCT GAGTTAGATG ATACCGTGGA TGTTGATATT CGACCTGAAG ATTTGAAGAT TGACGTTTAT CGAGCCAGTG GGGCCGGTGG ACAACATGTC AATAAGACTT CTTCAGCGGT TCGGATTACC CACGTGCCAA CGGGAATTGT CGTTGCCAGT CAAGCGCAAC GGTCACAATT ACAGAACCGA CAAACAGCAT TGAACATGTT ACGAGCGAAG TTGTACGAAC GTGAAGAAGA GAAGAAGGCT AAGGAACGGG CGGCCATCCA AGGTGAGCAA ATGGACATTG GGTGGGGCTC ACAAATTCGC TCCTACGTTT TTCATCCGTA TACGATGGTC AAGGATCACC GGACTAATTA TGAATCACAT CATGGGCAGG CTGTCATGGA TGGTGATCTT GATCCGTTTA TGGATGCTTA CTTACAATGG AAATTAGCCC AACGTAATCC GCAATAG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
VELSEYKHLI EEMQSAVDDF RGSLDLDALN ESIQENEARM AEPGFWDDQA AAQKVIDENN VLKGKYDTFK QLADEVGDLA VAYELLSEEP DAEMQAEFET DFQHAEHDLQ QYRLNLLLDG PYDRNNAILE IHPGAGGTES QDWGAMLLRM YTRWAASHNF KVETVDYQAG DEAGIKSVTL LISGHNAYGY LRSEKGVHRL VRISPFDAAG RRHTSFASVD VMPELDDTVD VDIRPEDLKI DVYRASGAGG QHVNKTSSAV RITHVPTGIV VASQAQRSQL QNRQTALNML RAKLYEREEE KKAKERAAIQ GEQMDIGWGS QIRSYVFHPY TMVKDHRTNY ESHHGQAVMD GDLDPFMDAY LQWKLAQRNP Q

Publication