Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200679"

Accession numberr200679 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismNitrobacter hamburgensis X14 [details]

Sequence

VariantX14
GenBank IDsNC_007964.1
SequenceDNA of 1132 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 1.4e-06 ORF1: 1.3e-247
ATGCGCGCTG AAATCGAAAG ACTCGTCGAA GAGATCAAGC AGTCGGTCGG GCTGCTGAGG AGGCATCTTT GACGTCGACA CATCGACCGC GCGGCTGGCA GAACTGAACA AGATCGCCGA GGATCCAAAC CTCTGGAACG ATCCCCAGAA GGCCCAGAAG CTGATGCAGG AGCGGACCTC GCTGGAGGAT TCGCTGACCG GTATCGGCAA GGTCGAGCGC GAACTCGAGG ACCAGATCGG CATGATCGAA CTCGGCGAGG CCGAGAACGA TCAGGCCATC GTCAACGATT CCGAAAATGC CCTGAAGAAT CTCAAAAAGG AGGTCGCCCG CCGCGAGCTC GAGGCGCTGC TCTCGGGAGA GGCGGATCGC TTCAACACCT ATCTTGAGGT TCATGCCGGC GCGGGCGGCA CCGAAAGCCA GGACTGGGCC TCGATGCTCC TGCGCATGTA TGCGCGCTGG GCGGAGAAGC GCGGTTTCAA GATCGAGTAC CTGGAAGAAA CGCCAGGCGA GGAAGCCGGC ATCAAGTCGG CGACGATCCA GGTCAGCGGC CACAATGCTT ATGGCTGGCT CAAGACCGAG GCGGGCGTGC ACCGTCTCGT GAGAATCTCG CCGTTTGATT CCAACGCACG ACGGCATACG TCGTTTTCGA GCGTGGCGAT CTTCCCGGTG GTGGATGACA GCATCAAGAT CGACATCAAG GAATCCGACG TTCGCACCGA TACCATGCGC TCCGGCGGCG CCGGCGGCCA GCACGTCAAC AAGACCGAAT CGGCGGTGCG GCTGACGCAT ATTCCGACCG GGGTCGCGGT TGTTTGTCAG GCCGGACGTT CGCAGCACAA GAACCGCGCG CAGGCCTGGG ACATGCTGCG AGCGAGACTC TACCAAATCG AGCTCAAGAA GCGGGAAGAA CAGGCCGCCG CGGATCAGGC CGCCAAGACC GACATCGGCT GGGGCCATCA GATCCGATCC TACGTCCTGC AGCCCTATCA GATGGTGAAG GACCTCCGAA CCGGAGTGCA AACGTCGGAC ACTTCGGGTG TGCTCGACGG TGACCTCGAC GAATTCATGG CTGCGACGCT GGCGCAGAAA GCCTTCGGCA TCACGCCCGG TGCGGTCGAA GACGTGGATT AG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MRAEIERLVE EIKQSVGLLR RHLDVDTSTA RLAELNKIAE DPNLWNDPQK AQKLMQERTS LEDSLTGIGK VERELEDQIG MIELGEAEND QAIVNDSENA LKNLKKEVAR RELEALLSGE ADRFNTYLEV HAGAGGTESQ DWASMLLRMY ARWAEKRGFK IEYLEETPGE EAGIKSATIQ VSGHNAYGWL KTEAGVHRLV RISPFDSNAR RHTSFSSVAI FPVVDDSIKI DIKESDVRTD TMRSGGAGGQ HVNKTESAVR LTHIPTGVAV VCQAGRSQHK NRAQAWDMLR ARLYQIELKK REEQAAADQA AKTDIGWGHQ IRSYVLQPYQ MVKDLRTGVQ TSDTSGVLDG DLDEFMAATL AQKAFGITPG AVEDVD

Publication