Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200687"

Accession numberr200687 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismPelobacter carbinolicus DSM 2380 [details]

Sequence

VariantDSM 2380
GenBank IDsNC_007498.2
SequenceDNA of 1096 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 6e-06 ORF1: 5.5e-243
ATGTATCGTG AAGTTAATGA AATATTGGGT TCTCTCAAAA AGAAGCTCGA TGAGCTGAGG AGGTATCTTT GACGTTGATG CCAAGGCCGA GCGAGTCGCT GAGCTAGAGG CTGAAATGTC TCGTCCCGGA TTCTGGGAAT CGGGAGATCA GGCTCAGGAT ATTCTCAAGG AACGAACCGG TCTTGAGAAG CTGGTCACGT CTTTTCGTGA ATCGCAGCAG GAATTGGAAG ATCTGCAGCT TTTGGCAGAC CTCGGCGCCG AAAGCGGTGA TGAAGCCACG CTTGAAGAGA TCTCCGCTTT GTTGCCGGAT CTGCAGCGGC GGGTGGATAA AATGGAGTTT GCTCGCATGC TTTCCGGTGA GCACGATTCC TGTGACGCTA TTTTCAGTAT CAATGCCGGC GCCGGCGGTA CGGAGGCTCA GGATTGGGCC GATATGCTGC TGCGTATGTA TATGCGGTAT TTTGAGAAAA AAGGTTTCAA GGCCGAACTG ACCGATCATC AGCCCGGCGA TGAGGCGGGG ATCAAGGGTG CGACCCTTAC TGTTTCCGGG GATTATGCCT ACGGCTGGTT GCGGGCCGAA ATAGGGATTC ATCGCCTGGT GAGAATTTCG CCCTTCGATT CGAATGCTCG TCGGCACACC TCCTTTTGCT CGGTATTTGT CTTTCCGGAA TTGCCCGATG ATGTTGAGGT CGATATCAAC GAGAAGGACC TCAAGGTCGA TACTTACCGA TCCAGCGGTG CCGGCGGCCA GCATGTCAAC AAGACCGATT CGGCCATTCG TATTACCCAT GTTCCAAGCG GTATCGTTGT CGCGTGTCAG AATGAACGTT CTCAGCACAA GAACCGAGCT ACAGCGATGA AGCAACTCAA GGCCCGGTTG TATGAACTTG AATTGCGGAA AAAAGAAGAG GAAGCATCTG CTATCGCCGG TGAAAAGATG GAGATCGGGT GGGGCAGTCA GATTCGGTCT TACGTGCTGC ATCCCTATCG GATGGTAAAG GATCATCGCA CAAACTTTGA GTCCGGCAAT GCTGATGCTG TGCTCGACGG TGATCTGGAT GGTTTTATCG AGGCGTATCT CCTTTCGGCC AAGTAG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MYREVNEILG SLKKKLDELR RYLDVDAKAE RVAELEAEMS RPGFWESGDQ AQDILKERTG LEKLVTSFRE SQQELEDLQL LADLGAESGD EATLEEISAL LPDLQRRVDK MEFARMLSGE HDSCDAIFSI NAGAGGTEAQ DWADMLLRMY MRYFEKKGFK AELTDHQPGD EAGIKGATLT VSGDYAYGWL RAEIGIHRLV RISPFDSNAR RHTSFCSVFV FPELPDDVEV DINEKDLKVD TYRSSGAGGQ HVNKTDSAIR ITHVPSGIVV ACQNERSQHK NRATAMKQLK ARLYELELRK KEEEASAIAG EKMEIGWGSQ IRSYVLHPYR MVKDHRTNFE SGNADAVLDG DLDGFIEAYL LSAK

Publication