Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200688"

Accession numberr200688 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismPelodictyon luteolum DSM 273 [details]

Sequence

VariantDSM 273
GenBank IDsNC_007512.1
SequenceDNA of 1096 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 1.2e-07 ORF1: 1.4e-211
ATGTTTGAAC CACAAAAAGA AAGACTGCAG GACATCAACA GGCGCCTGGA ACAGTTACGG GGGTATCTTT GACGTCGACC AGCGCAAAGA GAAAATAGAG GATCTTGAAA AGGTTTCCGG AAACCCCGAA TTCTGGAACG ACCAGAAAGC CGCACACGCT GTCCTCAAGG AGTTGAACGA AAACCGCTCC TGGGTCGAGG GCTACGAAAA GCTCGCAGGG AAGGCTGAAT CCTGCCGCGA TGAGCTTGCA ATCGCAGACG AGCTGGAAGA CGAGTCGTTC GAACGGGAGC TGACAGCATC GATTGACGCC ATTGAGCAGG AAATTGCCGC CATCGAGTTC AAGAACATGC TCTCCGGCAA GGACGATCCC GGCAACGCCA TCATCACCAT CCATGCGGGG GCCGGCGGCA CCGAGGCTCA GGACTGGGCC GAAATGCTCT ACAGGATGTA CATGCGGTGG GCCGAGCGCA AGGGATTCAA GGTCTATACC GACGACTATC AGGAGGGTGA CGGCGCCGGC ATAAAGACCG CAACCCTTGA AATACAGGGA CCCTATGCCT ACGGCTACCT GAAGGCGGAA AACGGCGTAC ACCGTCTCGT ACGGGTCTCC CCGTTCGACT CGAATGCCCG GCGCCACACC TCGTTCGCCA GTGTCTACAC CTACCCCGAG GCTCCGCCCG ACGTGGAAAT CGAGGTCCGC AAGGAGGACC TTGAGCTCTC GACCTTCCGC AGCGGCGGCA AAGGCGGCCA GAACGTCAAC AAAGTGGAAA CCGCCGTACG CATCAAGCAT ATCCCCTCCG GCATCGTGGT CGGCTGCCAG CAGGAACGCT CGCAGTTCCA GAACAGGGAG CGCGCCATGA AGATGCTGAT GGCCCAGCTC TACCAGCGCC AGCGCGAGGA AGAGGATGCA AGGAAACGCG AGGTGGAAGG AAAGAAGAAA AAAATCGAGT GGGGAAGCCA GATCCGCAGC TACGTGCTCG ACGACCGCCG CATAAAGGAC CACCGCACCA ACTACGAGCG CTTCGACGTG GAAACCGTTC TGGACGGGGA TATCGACGAC TTCATGGAGA AGTACCTCTC CGAGTTCGGA GACTGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MFEPQKERLQ DINRRLEQLR GYLDVDQRKE KIEDLEKVSG NPEFWNDQKA AHAVLKELNE NRSWVEGYEK LAGKAESCRD ELAIADELED ESFERELTAS IDAIEQEIAA IEFKNMLSGK DDPGNAIITI HAGAGGTEAQ DWAEMLYRMY MRWAERKGFK VYTDDYQEGD GAGIKTATLE IQGPYAYGYL KAENGVHRLV RVSPFDSNAR RHTSFASVYT YPEAPPDVEI EVRKEDLELS TFRSGGKGGQ NVNKVETAVR IKHIPSGIVV GCQQERSQFQ NRERAMKMLM AQLYQRQREE EDARKREVEG KKKKIEWGSQ IRSYVLDDRR IKDHRTNYER FDVETVLDGD IDDFMEKYLS EFGD

Publication