Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200691"

Accession numberr200691 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismPolaromonas sp. JS666 [details]

Sequence

VariantJS666
GenBank IDsNC_007948.1
SequenceDNA of 1105 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 82)
DescriptionRF2 ORF0: 4.4e-08 ORF1: 2.3e-248
ATGGACGCAG AACGCATTAA CATCATCGGC AACCAGCTCG CAGACCTGAG CAACCGGGTA AACGAACTTC GGGGGTATCT TTGACTACCC TGCCAAAGAA CGAAAACTGA ACGAAGTCAA CGCCGCGCTC GAAGACCCCA AGGTCTGGGA CAACCCCAAG CGCGCACAGG AACTAGGCCG GGAAAAGAAA TCGCTTGAAG ACGTGGTGCA TGTCATCGAC CGGCTCACGC AGGAGTTGGC CGACAACACC GAGTTGTTCG AGATGTCCAA GGGCGAAGGC GACGAAGCCG GCATGCTGGC CATTGAAGAC GAAGCCGGCA AGGTGGCCAC CGAAGTCGAA AAGATGGAAT TCCGCCGGAT GTTCAACAAC CCGGCCGATC CGCTGCCCTG CTTTCTGGAC ATTCAGGCCG GCGCCGGCGG CACCGAAGCC TGTGACTGGG CCAGCATGCT GCTGCGCCAG TACCTCAAGT ACGCCGAGCG CAAGGGCTTC AAGACCACCA TTGAAGATGA AACCGCGGGC GACACGGCCG GCATCAAGGG CGCCACCATC AAGATCGAGG GCGAATACGC TTTTGGCCTG CTGCGCACCG AAACCGGCGT GCACCGCCTG GTCCGCAAGT CACCGTTTGA CTCCTCCGGC GGGCGCCACA CCTCGTTTGC CTCGGTGTTT GTCTACCCCG AGATTGATGA CTCGATCGAG ATCGACATCA ACCCATCGGA TGTGCGCACC GACACCTTCC GCGCCAGCGG CGCCGGCGGC CAGCACATCA ACAAGACCGA TTCGGCCGTG CGTTTGACGC ACATCCCGAC CGGTATCGTG GTGCAATGCC AGGACGGCCG TTCGCAGCAC AGCAACCGCG ATGTGGCGTG GAAGCGCCTG CGCTCGCGCC TGTATGACCA CGAGATGCGC AAACGCCAGG CCGAGCAGCA AAAGCTCGAA GACAGCAAGA CCGACGTGGG CTGGGGCCAC CAGATCCGCA GCTATGTGCT CGACCAGAGC CGCATCAAGG ACCTGCGCAC CAACTACGAA ACCTCGGCCA CGCAAAAGGT GCTTGACGGC GACCTCGACC CGTTTATCGA GGCTTCCCTG AAGCAGGGCG TCTGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications81..83:ribosomal_frameshift
MDAERINIIG NQLADLSNRV NELRGYLDYP AKERKLNEVN AALEDPKVWD NPKRAQELGR EKKSLEDVVH VIDRLTQELA DNTELFEMSK GEGDEAGMLA IEDEAGKVAT EVEKMEFRRM FNNPADPLPC FLDIQAGAGG TEACDWASML LRQYLKYAER KGFKTTIEDE TAGDTAGIKG ATIKIEGEYA FGLLRTETGV HRLVRKSPFD SSGGRHTSFA SVFVYPEIDD SIEIDINPSD VRTDTFRASG AGGQHINKTD SAVRLTHIPT GIVVQCQDGR SQHSNRDVAW KRLRSRLYDH EMRKRQAEQQ KLEDSKTDVG WGHQIRSYVL DQSRIKDLRT NYETSATQKV LDGDLDPFIE ASLKQGV

Publication