Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200699"

Accession numberr200699 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismPseudomonas fluorescens Pf0-1 [details]

Sequence

VariantPfO-1
GenBank IDsNC_007492.1
SequenceDNA of 1096 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 4.8e-10 ORF1: 1.9e-253
ATGGAAATCA ACCCGATCCT GAACACCATC AAGGACCTGT CCGAGCGCTC CGAAACTATT CGGGGGTATC TTTGACTACG ATCAAAAGCA TGAGCGTCTG ATCGAAGTCA ATCGCGAGCT TGAAGATCCT GCCGTCTGGA ACAAACCTGA ATACGCCCAG GAACTGGGCC GCGAGCGCGC TGCGCTGGCG CAGATCGTCG ATACCCTCGA CGAACTGAAC GGTGGCCTGG CCGATTGCCG CGAGCTGCTG GACATGGCTG TTGAAGAGAA CGACGAGGGC GCGGTCAACG ACGTCGTCGA AGTCCTTCAA GGTCTCGAAG AGTCCCTGTC CAAGCTCGAA TTCCGCCGTA TGTTCAGCCA CGAGATGGAC CCGAACAACG CCTACCTGGA CATCCAGGCC GGTTCCGGCG GCACCGAAGC CCAGGACTGG GCCAACATCC TGCTGCGCAT GTACCTGCGC TGGGCCGACA AGCGCGGTTT CGACGCAACC ATCATGGAGC TGTCGGCCGG TGAAGTCGCC GGGATCAAGG GTGCGACCGT GCACATCAAG GGCGAATACG CCTTTGGCTG GCTGCGTACC GAGATCGGCG TGCACCGTCT GGTGCGCAAG AGCCCGTTCG ACTCCGGCAA CCGTCGCCAC ACCTCGTTCT CCGCGGTTTT TGTCTCGCCC GAGATCGACG ACAAGGTGGA AATCGAAATC AACCCGGCAG ACCTGCGGAT CGACACCTAT CGTTCCTCCG GTGCCGGTGG TCAGCACGTA AACACCACCG ACTCGGCCGT ACGTATCACC CACGTACCGA CCAACACCGT GGTGAGCTGC CAGAACGAAC GTTCCCAGCA CGCCAACAAG GACACCGCCA TGAAAATGCT GCGGGCCAAG TTGTACGAGC AGGAAATGCA GAAGCGCAAC GCGGCGTCCC AGGCGCTGGA AGACACCAAG TCGGACATCG GCTGGGGTCA CCAGATCCGT TCGTATGTGC TCGATGCGTC GCGGATCAAG GATCTGCGTA CCAACATCGA ACGCAGCGAC TGCGACAAGG TACTCGACGG CGACATCGAC GAATACCTGG AAGCCAGCCT GAAATCGGGC CTGTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MEINPILNTI KDLSERSETI RGYLDYDQKH ERLIEVNREL EDPAVWNKPE YAQELGRERA ALAQIVDTLD ELNGGLADCR ELLDMAVEEN DEGAVNDVVE VLQGLEESLS KLEFRRMFSH EMDPNNAYLD IQAGSGGTEA QDWANILLRM YLRWADKRGF DATIMELSAG EVAGIKGATV HIKGEYAFGW LRTEIGVHRL VRKSPFDSGN RRHTSFSAVF VSPEIDDKVE IEINPADLRI DTYRSSGAGG QHVNTTDSAV RITHVPTNTV VSCQNERSQH ANKDTAMKML RAKLYEQEMQ KRNAASQALE DTKSDIGWGH QIRSYVLDAS RIKDLRTNIE RSDCDKVLDG DIDEYLEASL KSGL

Publication