Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200702"

Accession numberr200702 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismPseudomonas syringae pv. syringae B728a [details]

Sequence

VariantB728a
GenBank IDsNC_007005.1
SequenceDNA of 1096 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 5.7e-10 ORF1: 6.3e-253
ATGGAAATCA ACCCGATCCT AAACAGCATC AAGGATTTGT CCGAGCGCTC CGAAACCATT CGGGGGTATC TTTGACTACG ATCACAAACA TGATCGTCTG ACCGAAGTGA ACCGCGAGCT CGAAGATCCA AACGTCTGGA ACAACCCGGC CTACGCTCAG GAACTGGGGC GCGAGCGCTC CCTGCTGGCG CAGATCGTCG AAACCCTGGA CGAAATGTCC TCGGGTCTGG CCGATGCCAA AGACCTGTTG CTGATGTCTG CCGAAGAAGA AGACCAGGCT GCCGTCGATG ACGTCGCTGC CGAAGTCGAG CGCCTGCGCG AATCGCTGGA AAAGCTCGAA TTCCGCCGCA TGTTCAGCGG CGACATGGAC CCCAACAACG CCTACCTGGA CATCCAGGCC GGCTCCGGCG GTACCGAAGC GCAGGACTGG GCGAACATCC TGCTGCGCAT GTACCTGCGC TGGGCCGACA AGCGCGGTTT CGACGCCACC ATCATGGAAC TGTCCGCCGG TGAAGTCGCC GGTATCAAGG GCGCTACCGT GCACATCAAG GGCGAGTACG CCTTCGGCTG GCTGCGTACC GAGATCGGCG TTCATCGTCT GGTGCGCAAG AGCCCGTTCG ACTCCGGCAA CCGTCGCCAC ACCTCGTTCT CGGCCGTGTT CGTTTCGCCG GAAATCGATG ACAACATCGA AATCGACATC AACCCGGCGG ACCTGCGCAT CGACACCTAC CGCTCCTCCG GTGCCGGTGG TCAGCACGTA AACACCACTG ACTCGGCGGT GCGTATCACC CACGTTCCGA CCAACACCGT GGTCAGTTGC CAGAACGAGC GTTCCCAGCA TGCGAACAAG GACACCGCCA TGAAAATGCT GCGGGCCCGT TTGTATGAGC AGGAAGTGCA GAAGCGCAAC GCGGCGTCCC AGGCGCTCGA AGACACCAAG TCCGATATCG GCTGGGGTCA CCAGATTCGC TCCTACGTAC TGGACGCCTC GCGTATCAAG GACCTGCGGA CCAACATCGA ACGCAGCGAC TGCGACAAGG TGCTTGATGG CGATATCGAC GAATACCTGA TCGCGAGCCT CAAGCAAGGG CTGTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MEINPILNSI KDLSERSETI RGYLDYDHKH DRLTEVNREL EDPNVWNNPA YAQELGRERS LLAQIVETLD EMSSGLADAK DLLLMSAEEE DQAAVDDVAA EVERLRESLE KLEFRRMFSG DMDPNNAYLD IQAGSGGTEA QDWANILLRM YLRWADKRGF DATIMELSAG EVAGIKGATV HIKGEYAFGW LRTEIGVHRL VRKSPFDSGN RRHTSFSAVF VSPEIDDNIE IDINPADLRI DTYRSSGAGG QHVNTTDSAV RITHVPTNTV VSCQNERSQH ANKDTAMKML RARLYEQEVQ KRNAASQALE DTKSDIGWGH QIRSYVLDAS RIKDLRTNIE RSDCDKVLDG DIDEYLIASL KQGL

Publication