Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200721"

Accession numberr200721 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismRickettsia typhi str. Wilmington [details]

Sequence

VariantWilmington
GenBank IDsNC_006142.1
SequenceDNA of 1111 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 70)
DescriptionRF2 ORF0: 1.2e-05 ORF1: 7.5e-221
ATGCGAGCCG GAATAGAAAA CTATATAAAA AACATTGAGC AATCTTTAGA ACTAATTTGG AGGTCACTTT GACATTGAAT CATTAACTAT AAGACTTACA GAATTAGAAG AATTAACAGC AGATCCAAGT TTATGGAATA ATAATGCTAA TGCACAAATA TTACTAAGAG AAAAAACTAA TATAGAAGAA AAACTAAATG TTTTTAATAA CCTCAAATCA AATTTTGAAG ATATTTTAGA ACTTGAAGCA ATGGCTGAAG TCGAAAATGA TTTCGAGACT CTTAATCAAA TTGAACAAGA CTTTAAAAAA TTAAGTATCA TTGCCGCTAA ACTTGAAACT GAGTGCTTAT TTTCAGATGA ATCAGACTAC AATAACTGCT TTTTAGAAAT TAATGCTGGA GCAGGAGGAA CTGAAAGTCA TGATTGGGCA TCGATTATGA TGCGTATGTA TTTACGTTTT GCTGAACGAC TTGGTTTTAA AACACAAATA ATAAATATGA TTAATGGCGA AGAAGTAGGC ATTAAATCAT GTACGATTAG AATAATAGGT AAACGAGCTT ACGGCTGGTT TAAAACAGAA GCAGGAGTGC ATAGGCTAGT GCGCATTTCT CCATTTAATG CAGCAGGCAA AAGGATGACT AGCTTTGCAA GTAGCTGGGT ATATCCAGAA ATTGATGATG ATATAGCAAT CACTATTGAA GATAAAGATT TAAGAATCGA TACTTTTAGA GCATCAGGTG CAGGCGGACA ACACGTTAAT ACAACAGATT CTGCAGTACG TATCACGCAT ATACCAACAA ATACGGTAAC ACAATGTCAA AGTGACAGAT CACAACATAA GAATAAAGCT CAAGCAATGA AGATGCTTCA AGCAAAACTC TATAAGCTTG AAATGCAGAA ACGTACTGAC AGTGTTGATA AACAGAATGC TAATAAAACC GATAATAGTT GGGGGCATCA AATTAGATCA TATGTTTTGC AACCTTATCA AATTGTAAAA GATCTACGTA CTGATTACGA AACTTCCGAT ACTAAAGGAG TACTTGACGG TAACCTTGAA AATTTTGTCT CCGCAAGCCT TGCTATGAAT GCTAGTGGTA ATAAAAAATA A

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications69..71:ribosomal_frameshift
MRAGIENYIK NIEQSLELIW RSLDIESLTI RLTELEELTA DPSLWNNNAN AQILLREKTN IEEKLNVFNN LKSNFEDILE LEAMAEVEND FETLNQIEQD FKKLSIIAAK LETECLFSDE SDYNNCFLEI NAGAGGTESH DWASIMMRMY LRFAERLGFK TQIINMINGE EVGIKSCTIR IIGKRAYGWF KTEAGVHRLV RISPFNAAGK RMTSFASSWV YPEIDDDIAI TIEDKDLRID TFRASGAGGQ HVNTTDSAVR ITHIPTNTVT QCQSDRSQHK NKAQAMKMLQ AKLYKLEMQK RTDSVDKQNA NKTDNSWGHQ IRSYVLQPYQ IVKDLRTDYE TSDTKGVLDG NLENFVSASL AMNASGNKK

Publication