Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200727"

Accession numberr200727 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismSalmonella enterica subsp. enterica serovar Typhi str. CT18 [details]

Sequence

VariantCT18
GenBank IDsNC_003198.1
SequenceDNA of 1099 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 1.2e-09 ORF1: 4.1e-282
ATGTTTGAAA TTAACCCGGT GAATAACCGC ATTCAGGACC TCACGGAACG CACCAACGTT CTTAGGGGGT ATCTTTGACT ACGATGCTAA GAAAGAGCGT CTGGAAGAAG TAAACGCCGA GCTGGAACAG CCGGATGTCT GGAACGAACC TGAGCGCGCG CAGGCGCTGG GAAAAGAACG TTCATCGCTC GAAGCGATTG TCGATACGCT TGATCAAATG ACTCAGGGGC TGGACGACGT TTCCGGGCTG CTGGAACTAG CGGTAGAAGC TGACGACGAA GAGACGTTTA ACGAAGCCGT CGCGGAACTG AATACGCTGG AAGAGAAGCT GGCGCAGTTG GAATTCCGCC GGATGTTCTC CGGCGAGTAC GATAGCGCCG ATTGCTATCT CGATATTCAG GCCGGTTCCG GTGGTACTGA AGCACAGGAC TGGGCCAGCA TGTTGCTGCG TATGTATCTG CGTTGGGCGG AAGCGCGCGG CTTCAAGACG GAAGTCATTG AAGAGTCGGA AGGGGAAGTC GCCGGCATTA AGTCCGCGAC TATCAAAATC TCCGGCGAAT ATGCCTATGG CTGGCTGCGC ACTGAAACCG GCGTACATCG TCTGGTGCGT AAAAGCCCGT TCGACTCCGG CGGTCGCCGT CATACCTCGT TTAGCTCCGC GTTTGTGTAT CCGGAAGTGG ACGACGATAT CGATATCGAC ATTAACCCGG CGGATCTGCG TATCGACGTC TATCGCGCGT CTGGCGCAGG CGGTCAGCAC GTTAACCGTA CGGAATCCGC AGTGCGTATC ACCCATATTC CCACCGGGAT CGTGACGCAG TGCCAGAACG ACCGTTCGCA GCACAAAAAC AAAGACCAGG CCATGAAGCA GATGAAAGCG AAGCTTTATG AACTGGAGAT GCAGAAAAAG AACGCTGAAA AACAGGCGAT GGAAGACACT AAGTCTGATA TCGGCTGGGG AAGCCAGATT CGTTCCTATG TCCTGGACGA TTCCCGCATT AAAGACCTGC GTACTGGGGT GGAAACCCGC AATACACAGG CGGTACTGGA CGGTAGTCTG GATCAATTTA TCGAAGCAAG TTTGAAAGCA GGGCTATGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MFEINPVNNR IQDLTERTNV LRGYLDYDAK KERLEEVNAE LEQPDVWNEP ERAQALGKER SSLEAIVDTL DQMTQGLDDV SGLLELAVEA DDEETFNEAV AELNTLEEKL AQLEFRRMFS GEYDSADCYL DIQAGSGGTE AQDWASMLLR MYLRWAEARG FKTEVIEESE GEVAGIKSAT IKISGEYAYG WLRTETGVHR LVRKSPFDSG GRRHTSFSSA FVYPEVDDDI DIDINPADLR IDVYRASGAG GQHVNRTESA VRITHIPTGI VTQCQNDRSQ HKNKDQAMKQ MKAKLYELEM QKKNAEKQAM EDTKSDIGWG SQIRSYVLDD SRIKDLRTGV ETRNTQAVLD GSLDQFIEAS LKAGL

Publication