Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200732"

Accession numberr200732 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismShigella dysenteriae Sd197 [details]

Sequence

VariantSd197
GenBank IDsNC_007606.1
SequenceDNA of 1099 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 1.6e-09 ORF1: 7.4e-281
ATGTTTGAAA TTAATCCGGT AAATAATCGC ATTCAGGACC TCACGGAACG CTCCGACGTT CTTAGGGGGT ATCTTTGACT ACGACGCCAA GAAAGAGCGT CTGGAAGAAG TAAACGCCGA GCTGGAACAG CCGGATGTCT GGAACGAACC CGAACGCGCA CAGGCGCTGG GTAAAGAGCG TTCCTCCCTC GAAGCCGTTG TCGACACCCT CGACCAAATG AAACAGGGGC TGGAAGATGT TTCTGGTCTG CTGGAACTGG CTGTAGAAGC TGACGACGAA GAAACCTTTA ACGAAGCCGT TGCTGAACTC GACGCCCTGG AAGAAAAACT AGCGCAGCTT GAGTTCCGCC GTATGTTCTC TGGCGAATAT GACAGCGCCG ACTGCTACCT CGATATTCAG GCGGGGTCTG GCGGTACGGA AGCACAGGAC TGGGCGAGCA TGCTTGAGCG TATGTATCTG CGCTGGGCAG AATCGCGTGG TTTCAAAACT GAAATCATCG AAGAGTCGGA AGGTGAAGTG GCGGGTATTA AATCCGTGAC GATCAAAATC TCCGGCGATT ACGCTTACGG CTGGCTGCGT ACAGAAACTG GTGTTCACCG CCTGGTGCGT AAGAGCCCGT TTGACTCCGG CGGTCGTCGC CATACGTCGT TCAGCTCCGC GTTTGTTTAC CCGGAAGTCG ATGACGATAT CGATATCGAA ATCAACCCGG CGGATCTGCG CATTGACGTT TATCGCGCGT CCGGCGCGGG CGGTCAGCAC GTTAACCGTA CCGAATCTGC GGTGCGTATT ACCCACATCC CGACCGGGAT CGTGACCCAG TGCCAGAACG ACCGTTCCCA GCACAAGAAC AAAGACCAGG CCATGAAGCA GATGAAAGCG AAGCTTTATG AACTGGAGAT GCAGAAGAAA AATGCTGAGA AACAGGCGAT GGAAGATAAC AAATCTGACA TCGGCTGGGG CAGCCAGATT CGTTCTTATG TCCTTGATGA CTCCCGCATT AAAGATCTGC GCACCGGGGT AGAAACCCGC AACACGCAGG CCGTGCTGGA CGGCAGCCTG GATCAATTTA TCGAAGCAAG TTTGAAAGCA GGGTTATGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MFEINPVNNR IQDLTERSDV LRGYLDYDAK KERLEEVNAE LEQPDVWNEP ERAQALGKER SSLEAVVDTL DQMKQGLEDV SGLLELAVEA DDEETFNEAV AELDALEEKL AQLEFRRMFS GEYDSADCYL DIQAGSGGTE AQDWASMLER MYLRWAESRG FKTEIIEESE GEVAGIKSVT IKISGDYAYG WLRTETGVHR LVRKSPFDSG GRRHTSFSSA FVYPEVDDDI DIEINPADLR IDVYRASGAG GQHVNRTESA VRITHIPTGI VTQCQNDRSQ HKNKDQAMKQ MKAKLYELEM QKKNAEKQAM EDNKSDIGWG SQIRSYVLDD SRIKDLRTGV ETRNTQAVLD GSLDQFIEAS LKAGL

Publication