Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200742"

Accession numberr200742 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismStaphylococcus aureus subsp. aureus MW2 [details]

Sequence

VariantMW2
GenBank IDsNC_003923.1
SequenceDNA of 1111 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 7.3e-07 ORF1: 8.4e-256
ATGGAATTAT CAGAAATCAA ACGAAATATA GATAAGTATA ATCAAGATTT AACACAAATT AGGGGGTCTC TTTGACTTAG AGAACAAAGA AACTAATATT CAAGAATATG AAGAAATGAT GGCAGAACCT AATTTTTGGG ATAACCAAAC GAAAGCGCAA GATATTATAG ATAAAAATAA TGCGTTAAAA GCAATAGTTA ATGGTTATAA AACACTACAA GCAGAAGTAG ATGACATGGA TGCTACTTGG GATTTATTAC AAGAAGAATT TGATGAAGAA ATGAAAGAAG ACTTAGAGCA AGAGGTCATT AATTTTAAGG CTAAAGTGGA TGAATACGAA TTGCAATTAT TATTAGATGG GCCTCACGAT GCCAATAACG CAATTCTAGA GTTACATCCT GGTGCAGGTG GCACGGAGTC TCAAGATTGG GCTAATATGC TATTTAGAAT GTATCAACGT TATTGTGAGA AGAAAGGCTT TAAAGTTGAA ACTGTTGATT ATCTACCTGG GGATGAAGCA GGGATTAAAA GTGTAACATT GCTCATCAAA GGGCATAATG CTTATGGTTA TTTAAAAGCT GAAAAAGGTG TACACCGACT AGTACGAATT TCTCCATTTG ATTCATCAGG ACGTCGTCAT ACATCATTTG CATCATGCGA CGTTATTCCA GATTTTAATA ATGATGAAAT AGAGATTGAA ATCAATCCGG ATGATATTAC AGTTGATACA TTCAGAGCTT CTGGTGCAGG TGGTCAGCAT ATTAACAAAA CTGAATCGGC AATACGAATT ACCCACCACC CCTCAGGTAT AGTTGTTAAT AACCAAAATG AACGTTCTCA AATTAAAAAC CGTGAAGCAG CTATGAAAAT GTTAAAGTCT AAATTATATC AATTAAAATT GGAAGAGCAG GCACGTGAAA TGGCTGAAAT TCGTGGCGAA CAAAAAGAAA TCGGCTGGGG AAGCCAAATT AGATCATATG TTTTCCATCC ATACTCAATG GTGAAAGATC ATCGTACGAA CGAAGAAACA GGTAAGGTTG ATGCAGTGAT GGATGGAGAC ATTGGACCAT TTATCGAATC ATATTTAAGA CAGACAATGT CGCACGATTA A

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MELSEIKRNI DKYNQDLTQI RGSLDLENKE TNIQEYEEMM AEPNFWDNQT KAQDIIDKNN ALKAIVNGYK TLQAEVDDMD ATWDLLQEEF DEEMKEDLEQ EVINFKAKVD EYELQLLLDG PHDANNAILE LHPGAGGTES QDWANMLFRM YQRYCEKKGF KVETVDYLPG DEAGIKSVTL LIKGHNAYGY LKAEKGVHRL VRISPFDSSG RRHTSFASCD VIPDFNNDEI EIEINPDDIT VDTFRASGAG GQHINKTESA IRITHHPSGI VVNNQNERSQ IKNREAAMKM LKSKLYQLKL EEQAREMAEI RGEQKEIGWG SQIRSYVFHP YSMVKDHRTN EETGKVDAVM DGDIGPFIES YLRQTMSHD

Publication