Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200747"

Accession numberr200747 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismStaphylococcus epidermidis ATCC 12228 [details]

Sequence

VariantATCC 12228
GenBank IDsNC_004461.1
SequenceDNA of 1117 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 1.3e-07 ORF1: 3.1e-257
ATGGAACTAT CTGAGATTAA AAGAAATTTA GAAGAATATC AAAATCACTT AAATCAAATT AGGGGGTCTC TTTGACTTAG AAAATAAAGA GACGAACATA CAAGAGTATG AAGAAATGAT GACTGATCCT GATTTTTGGA ATGATCAAAC TAAAGCACAA GATATCATTG ATAAGAACAA TGCACTAAAA TCTATAGTAA ATGGGTATTA TCAACTGACA AATGCTGTCG ATGATATGAG TGCGACGAGA GAGTTATTAC AAGAAGAATA TGATGAGGAT ATGAAGATAG AATTAGAAGA GGAAGTTCAG CAATTTGAAG AACAAATTGA TCAATATGAG TTACAATTAC TCCTCGACGG ACCACATGAT GCAAATAATG CTATATTAGA GCTTCATCCC GGTGCTGGCG GTACAGAATC ACAAGATTGG GTAAGTATGC TTCTTAGGAT GTATCAACGT TACTGTGAAC AAAATGGCTT TAAAGTTGAA ACGGTTGATT ATCTTCCAGG AGATGAAGCA GGCGTTAAAA GTGTCACATT ACTTATTAAA GGACATAATG CTTATGGTTA TTTAAAGGCA GAAAAAGGTG TTCATCGTTT AGTTAGAATT TCACCTTTCG ATTCATCTGG TAGACGCCAT ACTTCTTTTG CATCATGTGA TGTTATTCCT GATTTTAATA ATGATGAAAT TGAAATCGAG ATTAACCCAG ATGATATCAC AGTGGATACT TTTAGAGCTT CAGGCGCTGG TGGACAACAT ATTAACAAAA CTGAGTCTGC AATTAGAATT ACACATCACC CTACAGGTAT TGTAGTCAAC AACCAAAATG AACGATCTCA AATAAAAAAT AGAGAAGCTG CAATGAAAAT GTTGAAGTCC AAACTTTATC AATTAAAGTT AGAAGAGCAA GAGCAAGAAA TGGCTGAAAT TCGAGGCGAA CAAAAAGACA TTGGATGGGG AAGTCAGATT CGTTCTTACG TCTTTCATCC ATATTCAATG ATTAAAGATC ATCGTACGAA TGAAGAAACT GGTAAAGTAG ACGCTGTTAT GGATGGAGAA ATAGGCCCAT TCATAGAAGC TTATTTAAGA AAAGAAATGG ATAGTCGAGA CGTATAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MELSEIKRNL EEYQNHLNQI RGSLDLENKE TNIQEYEEMM TDPDFWNDQT KAQDIIDKNN ALKSIVNGYY QLTNAVDDMS ATRELLQEEY DEDMKIELEE EVQQFEEQID QYELQLLLDG PHDANNAILE LHPGAGGTES QDWVSMLLRM YQRYCEQNGF KVETVDYLPG DEAGVKSVTL LIKGHNAYGY LKAEKGVHRL VRISPFDSSG RRHTSFASCD VIPDFNNDEI EIEINPDDIT VDTFRASGAG GQHINKTESA IRITHHPTGI VVNNQNERSQ IKNREAAMKM LKSKLYQLKL EEQEQEMAEI RGEQKDIGWG SQIRSYVFHP YSMIKDHRTN EETGKVDAVM DGEIGPFIEA YLRKEMDSRD V

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