Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200776"

Accession numberr200776 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismSynechococcus sp. JA-3-3Ab [details]

Sequence

VariantJA-3-3Ab
GenBank IDsNC_007775.1
SequenceDNA of 1129 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 0.00036 ORF1: 1.6e-171
ATGGAACTGG CCGATCTGAG ACGCACCCTA GAATCGCTCA CCTCGCGCCT GAGCAGTGCT CAGGACTATC TTTGACCTGC CCCACCTGGA GCAGCAGATC GCCATTTTGG AGCAGGAAGC AGCGCAGCCG CAGTTTTGGA ACGATGCCGA GGCGGCCCGC CGCCACCTGC AACAGCTCAA CAGCCTCAAG GCCTCCTGGG ATCAAATCCA CCGCTGGAAG GATCGCCTAG AGGATGCTGC CAGCGCCTTG GAGCTGCTGC AAGAAGACCC GGACCCGGAG CTGTTGGCCG AAGTGTCCGG ATCCCTGGCG GCGGTGGAGC GGGAGCTCGG CCAATGGGAG CTGCGGCAAC TGCTTTCGGG CCCCTACGAC AAAAACGGCG CCATCCTCAC CATCACCGCT GGCGCGGGGG GAACCGATGC CCAAGACTGG GCGGAGATGC TCCTGAAGAT GTACACCCGC TGGGCGGAAA ACCAGGGCTA CAAGGTCACG CTTTCGGAAT ACTCGCAAGG GGCAGAGGCC GGCATCAAGT CGGCCACCCT GCTGATTGAA GGTCCCTATG CCTACGGGTA TCTTTCCGCC GAGAAGGGCA ACCACCGCAT GGAGCGCATC AGCCCCTTTA ACGCCAACGG CAAGCGCCAG ACCAGCTTTG CCGGCGTTGA GGTCATGCCT ATCCTGGAGG AGGACAATGA GTTCGAGCTG AGGATGGAGG ATCTGGAGTT CGAGACTTCT CGTTCCGGCG GGGCAGGGGG CCAAAACGTC AACAAGGTGG AAACGGCGGT GCGGGTTATC CACAAGCCCA CCGGCATTGC CGTGCGCTGC ACCGAAGAGC GCTCCCAACT GCAAAACAAG GAGCGGGCCA TCCAGATCCT GAAGGCGAAG CTGATCGAGC TTGAGGAAGA AAAGCGCCGG CAAAAGCTGG CCGAGATCCG GGGTGAGATG GTGACCCAGG GCTTTGGGGG TCGGATTCGC ACCTACACTT TCGATCCCTA CAAGTTGATC AAAGACCACC GCACCAACGC CGAAACCTAC AATGTCGAGG CGTTTATGAA TGGCGAACCG GAGGAGCTGA TGCACTTTAT CCAGGCCTAC CTGCGGCAGG AACGGGCCAA GCAAGCCGCC GCCGTCTAG

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MELADLRRTL ESLTSRLSSA QDYLDLPHLE QQIAILEQEA AQPQFWNDAE AARRHLQQLN SLKASWDQIH RWKDRLEDAA SALELLQEDP DPELLAEVSG SLAAVERELG QWELRQLLSG PYDKNGAILT ITAGAGGTDA QDWAEMLLKM YTRWAENQGY KVTLSEYSQG AEAGIKSATL LIEGPYAYGY LSAEKGNHRM ERISPFNANG KRQTSFAGVE VMPILEEDNE FELRMEDLEF ETSRSGGAGG QNVNKVETAV RVIHKPTGIA VRCTEERSQL QNKERAIQIL KAKLIELEEE KRRQKLAEIR GEMVTQGFGG RIRTYTFDPY KLIKDHRTNA ETYNVEAFMN GEPEELMHFI QAYLRQERAK QAAAV

Publication