Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200786"

Accession numberr200786 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismTreponema pallidum subsp. pallidum str. Nichols [details]

Sequence

VariantNichols
GenBank IDsNC_000919.1
SequenceDNA of 1123 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 5.3e-06 ORF1: 8.1e-219
ATGGAAATCG AAGAATTTGG TCCACAAATC ACCGCCCTCG AGGCGCGCGT GCAGGAAGTA TGGGGGAGTC TTTGACGTTG CCGCATACGA GGCGCGCATA GCAACGCTTG AGGCTGCTGC AGCAGCGCCT GACTTTTGGA GCGAACGCGC GCGTGCCGAA GCGCTGTTAG CGGAACTGAA AACGCTACGC GCAACGCTTG AGCCGTGGCG TGCGCTGCGC CGTGAGAGCG CAGATCTGCG CGCGTTGTAC GAGCTTGCCC GCGAGGCGCA AGACGCATCG CTGGAGCCAG AACTTTCCTC CCTTTTTTCA GACATTTCTG CTCGTTTCGA AGAGGCATCG CTTACCCGTC TCCTGCACGA AGAGGTAGAC CGCCTCGACG CGTTTGTTAC CATCCACTCC GGCGCAGGAG GAGTGGAGGC CTGCGACTGG GCACAGATGC TCATGCGCAT GTACACGCGC TGGGCAGAGC GGCGCAGCTT TTGCGTACAC ATAGTTGACT TACTTGAGTC AGAAGGGGGA GTAAAATCGG TGACGTTAAA AATTTGCGGG TCACACGCCT TTGGTTTTCT CAAGGGAGAA ACGGGGGTAC ACCGGCTCGT GCGCATCAGT CCGTTTGACT CTGCCGCGCG CAGACATACC TCTTTTACCT CCACCTACGT CTTCCCCGTA TTAGACGATC ACGTTGAGGT GCACATACGG AGCGAAGACA TGCGGGTAGA TACCTACCGC TCAGGGGGAG CAGGCGGTCA ACATGTCAAT AAAACGGACT CTGCCGTGCG CATCACGCAT CTGCCTACAG GGATAGTAGT CACCTGCCAG AACGAGCGCA GCCAAATCAG CAACCGTGCA ACGGCGCTGA GCTTGTTACG CGCCCGCCTG TACGCCTATG AACGGCAAAA AAAACAGCAG GAACATCAAC GGTTTGCTTC TGAAAAGAAG GATATTTCGT GGGGAAATCA GATTCGCTCG TACGTCTTTC ATCCCTACAC CATGGTTAAA GATCACCGCA GCAAGTGCGA AACGGGGAAT ATTCACGCAG TCATGGACGG AGCGTTAGAA CCGTTCATCC GTTCCTACTT GGAGTTTCTG TGTACCAGTA CCCAGTGTGT AGAACCACAG TGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MEIEEFGPQI TALEARVQEV WGSLDVAAYE ARIATLEAAA AAPDFWSERA RAEALLAELK TLRATLEPWR ALRRESADLR ALYELAREAQ DASLEPELSS LFSDISARFE EASLTRLLHE EVDRLDAFVT IHSGAGGVEA CDWAQMLMRM YTRWAERRSF CVHIVDLLES EGGVKSVTLK ICGSHAFGFL KGETGVHRLV RISPFDSAAR RHTSFTSTYV FPVLDDHVEV HIRSEDMRVD TYRSGGAGGQ HVNKTDSAVR ITHLPTGIVV TCQNERSQIS NRATALSLLR ARLYAYERQK KQQEHQRFAS EKKDISWGNQ IRSYVFHPYT MVKDHRSKCE TGNIHAVMDG ALEPFIRSYL EFLCTSTQCV EPQ

Publication