Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200790"

Accession numberr200790 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismVibrio vulnificus CMCP6 [details]

Sequence

VariantCMCP6
GenBank IDsNC_004459.2
SequenceDNA of 1099 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 2.2e-09 ORF1: 1.3e-269
ATGTTTGAAA TCAATCCCAT TAAAAACCGT CTACAGGACG TGTCTGAGCG CACAAATGTC CTGAGGGGGT ATCTTTGACT ATGACGCTAA GAAAGAGCGT CTAGAAGAAG TTAACGCAGA ACTTGAACAA CCGGACGTTT GGAACGAGCC TGATCGAGCG CAAGCTCTCG GTCGTGAACG TGCGTCACTG GAAGCGGTTG TTGAAACCAT TGATCAACTT GATCAAGGTG TGGATGACGT TGAAGGTTTG CTTGAGTTGG CCATTGAAGC TGAAGATCAA GAGACCTTTG ATGAAATCGG TCCAGAACTT GAAGCTTTAG AAGAGAAGCT CGCGGGCCTA GAGTTCCGTC GCATGTTCTC TGGCGCACAC GATTCTTCAG ATTGCTATAT TGACCTGCAA GCAGGTTCTG GCGGTACAGA AGCACAAGAC TGGACGAGCA TGATGCTTCG CATGTATCTT CGTTGGGCTG AAGCGAAAGG CTTCAAAACC GAAGTGATCG AAGTCTCCGA AGGAGATGTT GCTGGCCTTA AGTCGGTCAC CGTACGTATT ATCGGTGATT ATGCTTATGG TTGGTTGCGT ACCGAAACGG GTGTTCACCG TTTGGTGCGT AAGTCTCCGT TTGACTCAGG CGGTCGTCGT CACACTTCTT TTGCTTCTGC GTTTGTTTAC CCAGAGATTG ATGAAAACAT CGACATCGAC ATTAACCCTG CCGATCTCCG TATTGACGTG TATCGTGCGT CTGGTGCGGG TGGTCAGCAC GTAAACACCA CCGAATCTGC GGTACGTATT ACCCACGTAC CAACGAATAC CGTGGTTCAG TGTCAGAACG ACCGTTCTCA ACACAAAAAC AAAGATCAAG CGATGAAGCA GCTTCGCGCT AAGCTGTTTG AACTTGAGTT GCAAAAGCAA AATGCGGAAA AACAAGCTAA TGAAGACGCT AAGTCTGACA TTGGCTGGGG TAGCCAGATC CGTTCTTACG TATTGGATGA TTCACGCATT AAAGACCTCC GTACGGGCGT CGAAAACCGT AATACTCAAG CGGTTCTTGA CGGTGATCTG GACAAATTTA TTGAAGCTAG CCTGAAATCA GGCCTTTAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MFEINPIKNR LQDVSERTNV LRGYLDYDAK KERLEEVNAE LEQPDVWNEP DRAQALGRER ASLEAVVETI DQLDQGVDDV EGLLELAIEA EDQETFDEIG PELEALEEKL AGLEFRRMFS GAHDSSDCYI DLQAGSGGTE AQDWTSMMLR MYLRWAEAKG FKTEVIEVSE GDVAGLKSVT VRIIGDYAYG WLRTETGVHR LVRKSPFDSG GRRHTSFASA FVYPEIDENI DIDINPADLR IDVYRASGAG GQHVNTTESA VRITHVPTNT VVQCQNDRSQ HKNKDQAMKQ LRAKLFELEL QKQNAEKQAN EDAKSDIGWG SQIRSYVLDD SRIKDLRTGV ENRNTQAVLD GDLDKFIEAS LKSGL

Publication