Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200799"

Accession numberr200799 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismXylella fastidiosa 9a5c [details]

Sequence

Variant9a5c
GenBank IDsNC_002488.3
SequenceDNA of 1126 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 76)
DescriptionRF2 ORF0: 5.5e-09 ORF1: 5.7e-249
ATGATCGAAA TTAATCCGAT ACGCCAGCGA ATCGCCGATC TGAATGATCG GATGATTTCG CTGAGGGGGT ATCTTTGACT ATGACGCCAA GAAGGAGCGT CTGGAAGAAG TGACCCGTGA GCTGGAAAGC CCCACGATCT GGAACACTCC AGACTATGCG CAGCAACTGG GCCGGGAACG CTCGCTACTG GATAAAACCG TCACCGGCAT TGCTCATGTG CTGAACGGGG TCGCTGAAGC CAGCGAATTT TTGGATCTGG CTGAAATAGA GCAAGATCAG GAGATGTTGC AGGCTGTCCT GAACGACGTG GACATCTATC AACTTCAGGT CGAGAAACTG GAGTTTCAGC GCATGTTTTC CGGGAAGATG GACGGTGCCA ATGCGTTTGT TGACATCCAG GCCGGTGCTG GAGGGACCGA GGCCCAAGAT TGGGCAGAGA TGCTGCTGCG TATGTATTTG CGTTGGGCCG AGGGGCGTGG TTGGAAGGCC GAATTGCTGG AAGTTTCTGG CGGTGAAGTG GCCGGCATCA AATCAGCCAC GTTTCGCGTG GAGGGCGATT TTGCCTACGG TTGGTTGAAG ACGGAGACTG GGGTGCATCG TTTGGTGCGT AAGTCGCCAT TTGATTCGGA TAACCGTCGC CATACGAGCT TTACCTCTGT TTTTGTTTCC CCGGAGGTCG ATGACAACAT CGACATTGAG ATTAACCCGG CCGACTTGAA GACCGATGTA TACCGCTCCT CTGGGGCTGG TGGTCAGCAC GTGAACAAGA CGGAGTCTGC AGTACGTATC ACCCACGTAC CGAGTGGGAT TGTGGTGGCC TGCCAGACGG AACGTAGTCA GCATGCTAAC CGTGATCGTG CGATGAAGAT GCTGGCGGCC AAGTTGTACG AGTCGGAGAT CCAGAAGCGG AATGCTGAGA AAGACGTACT GGAGGCCTCT AAGTCCGATA TCGGCTGGGG GAGTCAGATT CGCAATTACG TATTGGATCA GAGTCGGATT AAAGATCTGC GTACTGGTGT TGAGCGCAGC GATACTCAGA AAGTACTTGA CGGCGATTTG GATGAGTTTA TCGAAGCGAG TTTGAGGGCT GGTTTGGAAG CAGGCGCTAA ACGCGCCGAT GCATGA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications75..77:ribosomal_frameshift
MIEINPIRQR IADLNDRMIS LRGYLDYDAK KERLEEVTRE LESPTIWNTP DYAQQLGRER SLLDKTVTGI AHVLNGVAEA SEFLDLAEIE QDQEMLQAVL NDVDIYQLQV EKLEFQRMFS GKMDGANAFV DIQAGAGGTE AQDWAEMLLR MYLRWAEGRG WKAELLEVSG GEVAGIKSAT FRVEGDFAYG WLKTETGVHR LVRKSPFDSD NRRHTSFTSV FVSPEVDDNI DIEINPADLK TDVYRSSGAG GQHVNKTESA VRITHVPSGI VVACQTERSQ HANRDRAMKM LAAKLYESEI QKRNAEKDVL EASKSDIGWG SQIRNYVLDQ SRIKDLRTGV ERSDTQKVLD GDLDEFIEAS LRAGLEAGAK RADA

Publication