Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200808"

Accession numberr200808 [export]
Locus nameprfB
DescriptionBacterial release factor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismLactobacillus delbrueckii subsp. bulgaricus ATCC 11842 [details]

Sequence

VariantATCC 11842
GenBank IDsNC_008054.1
SequenceDNA of 1117 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 73)
DescriptionRF2 ORF0: 1.8e-09 ORF1: 3.9e-234
ATGGAAATCA GTGAAATTCA AAATGCTTTA GACGAGTTGC GGACCCGGCT TAACCACTTC AGGGGGTCTC TTTGACTTCG ATAATATTAG CGAAAGCATT GAAATCAACG AAGCCAAGAT GGCGGAACCG GGCTTTTGGG ACAATCAGGA AAAGGCACAG AAATTGATCA GTGAGACCAA CCTGCTCAAG GAAAAGCGGG ACTCCTTCCT GGCTCTGAAA AAAGACCTGA CCGATGAAGA AACGGCCCTG GAATTGCTGC GCCTGGAAGC AGACGCGGAC CTGCAAAAGG ACACCGAAGA CCAGCTGGCC AAGCTGCAGG AAGAGTTCCA TCAGTATGAA TTGAACCTGC TCTTGTCGGG CGAGTACGAT GACCATAACG CCTTGATGGA AATCCACCCG GGGGCCGGCG GCACTGAAGC CATGGACTGG GGGAACATGC TGCTCCGGAT GTACCAGCGC TATTGCGACT CCCGTGGCCT TAAGTTTGAA GTCAACAACT TTGAACCAGG TGATGAAGCC GGTTTAAAGA GCGTCAGCGT CCGGATTTCC GGCAAGAATG CCTACGGGCT GCTGAAGTCT GAACACGGCG TTCACCGCCT GGTCCGGATT TCGCCTTTTG ACTCAGCCAA AAGACGGCAC ACTTCTTTTG CCTCGGTTGA AGTTATCCCC GAAGTCGATG ACTCCATTGA AATCGACATT GATCCTAAGG ACCTAAGAAT TGACGTCTAC CGGTCATCCG GGGCGGGCGG CCAGCACATT AACAAGACTT CCAGTGCCGT CCGGATTACC CACATCCCAA CCGGGATCGT GACGACTTCC CAGGCCCAGC GGTCCCAGTT CCAGAACCGG GACACGGCCA TGAATGAAAT GCGGGCCAAG CTTTTCCACC TGGAAGAAGA GAAGAAGCGC AAGGAAAAGG CGGCCTTGAA GGGTGAGCAA TTGGACATTG CCTGGGGCTC GCAGATCCGG TCTTACGTCT TCCACCCATA CAGCATGGTC AAAGACCACC GGACCGGCTA TGAAACCGCC GATGTGGGCG GGGTGATGGA CGGGAAGCTG GATCCCTTCA TCTACGCCTA CCTGCAGTGG CGTTTGAGCC AGGAAAATCC AGAATAA

Product

ProductprfB
DescriptionBacterial release factor 2
Modifications72..74:ribosomal_frameshift
MEISEIQNAL DELRTRLNHF RGSLDFDNIS ESIEINEAKM AEPGFWDNQE KAQKLISETN LLKEKRDSFL ALKKDLTDEE TALELLRLEA DADLQKDTED QLAKLQEEFH QYELNLLLSG EYDDHNALME IHPGAGGTEA MDWGNMLLRM YQRYCDSRGL KFEVNNFEPG DEAGLKSVSV RISGKNAYGL LKSEHGVHRL VRISPFDSAK RRHTSFASVE VIPEVDDSIE IDIDPKDLRI DVYRSSGAGG QHINKTSSAV RITHIPTGIV TTSQAQRSQF QNRDTAMNEM RAKLFHLEEE KKRKEKAALK GEQLDIAWGS QIRSYVFHPY SMVKDHRTGY ETADVGGVMD GKLDPFIYAY LQWRLSQENP E

Publication