Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200844"

Accession numberr200844 [export]
Locus nameAZ
DescriptionOrnithine decarboxylase antizyme AZ
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismAncylostoma caninum [details]

Sequence

VariantShanghai strain
GenBank IDsAW627108.1
SequencemRNA of 486 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 138)
DescriptionThe sequence seems incomplete, 3' of the CDS is missing; AZ ORF0: 7.4e-13 ORF1: 1.3e-72
CACGTTCTTC CGCTTCTATC GCTTCTACAC CTCGCTTCAA GATGTCGTCA AGTATTATTA GTAATAATAC GCAGAGTAAT AATAGCAGCT CGACCACCGT CTGTGAGCAC AACGACGGCG CGGTCGGATG GTGTTTTTGA CGTCCCTCAA AGTGTAGCAA GTCGTACTGG TGATGTGACA AATCGGGTGG GGGCAGTGTC GAAGGAATGG CGTTGGGCAA TGGTGGATCC GCATTCATTA GCTGTCATCA TACCCGTGGA TCAGAATCCG AAAAATGTAT CTAGAGAGCG TTTTGTTTCG CTTCTCGAGT ATTGTGAGGA GGAGCTCGGT CTTGACCGAG TGCTGGCAGT GTTTGAAAAG CCTGGCTTGT CAATGTCAGA AGGGTTCCCT CGCACGCTCC GGTATGTCGG TTTCCGTGTT CTTTCGCCTG ACGCCGGTCC TAATGTGTTA GCATGTGACA AGTATTTCGT GATGAGCTAT TCCGTT

Product

ProductOAZN_ORF1
DescriptionOrnithine decarboxylase antizyme AZ
Modifications137..139:ribosomal_frameshift
MSSSIISNNT QSNNSSSTTV CEHNDGAVGW CFDVPQSVAS RTGDVTNRVG AVSKEWRWAM VDPHSLAVII PVDQNPKNVS RERFVSLLEY CEEELGLDRV LAVFEKPGLS MSEGFPRTLR YVGFRVLSPD AGPNVLACDK YFVMSYSV

Publication