Recode v. 2.0 / Database of translational recoding events.
Details for "r200847"
| Accession number | r200847 [export] |
| Locus name | AZ |
| Description | Ornithine decarboxylase antizyme AZ |
| Recode status | Reviewed |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Lumbricus rubellus [details] |
Sequence
Recoding event
| Event type | +1 Frameshifting (position: 90) |
| Description | AZ ORF0: 1.1e-12 ORF1: 3.6e-106 |
TAGAAATGGA GAATATGTCG TCAATATCGA ATAAGTTGAT TGTGAAACAC TTCAGTGTTC AACTGGGCAC
AGGGCCTCGG CATTGGTCCT GATGTGTCCC ACGCCGTAAA TGTGTCTGCT TGCAAGACAG AGGGCAACGG
TGTGGGGGAT TTTGCAGAGC CCCCTGTCGG TTCCAAAGGA TTTCATCTGA TGCGCGATGC TTTGGAATTT
GGCGTTTCTG GAGGTGTGGT GCGCGTTTCA TTTCGGAGTG TTGTGGGAGA TGGAAAGGTC TTTCTCTGGG
AAGCAGTGCT GGTTGGGCGG AAGCTCTTTG TGGAAGTGCC GGATGGTATC ATGTTCAACA ACTCAAAGGA
GAGTTTCATC AGCATGCTTG AATACGCGGA ACAAACACTC CACTGCAGTC ATGTCATCAT CTGCATGAAG
AAAGACCGAT TTGACAGAGC CTCTTTGGTC CGTAACTTCT TGTTCCTGGG GTTTGCGCTT CTGCCTCCAG
GGCATCCGTA TATCCCAGCG GCTTCTGGAT CTATCGTCTA CTTGGCGTAC ACCCTTGACG ATCCCGGGGA
AGAGGACTCT GATTAGACCG GCAATGCGGA AATGGAATGA TCGCACCAGA CGAAGGCCAA ATGAAATCCT
TTGGAATCTA CTTGCACGTT GCTATGTTTT TGTGAGCAAG AAACCTATTT AAAAAAGTAT AAAAAAATTG
ATGTTAC
Product
| Product | OAZM_ORF1 |
| Description | Ornithine decarboxylase antizyme AZ |
| Modifications | 89..91:ribosomal_frameshift |
MSSISNKLIV KHFSVQLGTG PRHWSDVSHA VNVSACKTEG NGVGDFAEPP VGSKGFHLMR DALEFGVSGG
VVRVSFRSVV GDGKVFLWEA VLVGRKLFVE VPDGIMFNNS KESFISMLEY AEQTLHCSHV IICMKKDRFD
RASLVRNFLF LGFALLPPGH PYIPAASGSI VYLAYTLDDP GEEDSD
Publication
- Bekaert M, Ivanov IP, Atkins JF, Baranov PV. (2008) Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinformatics. 9(178). [abstract]