Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200851"

Accession numberr200851 [export]
Locus nameAZL
DescriptionOrnithine decarboxylase antizyme AZL
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismSalmo salar [details]

Sequence

VariantMcConnell
GenBank IDsBG934091.1,CN181345.1,DW532184.1,DY717579.1,EG822611.1,EG851891.1,EG883459.1,EG917439.1
SequencemRNA of 823 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 244)
DescriptionAZL ORF0: 1.4e-44 ORF1: 3e-119
GGGGATTACT CAGCCGACCA TTGCAGTGAG CAGTCAGAAA CCCGTCGTGT CTCTACCCGA GGCCGGATGG TAAAATCCAA CCTCCAGCGG ATCTTAAACA GTCATTGCTT TGCTCGCGAG AAAGAAGGAA AACCACAGTG CTGTACAGCC ATGGCGGATT TAAGTAATAG TATTTGTGAC ATGATTGGCA ATCTTTCCCC GCACTGTAGT AGTTCCCGTG GTCCGGGGCC TCTGTGGTGC TCCTGATGCC CCTCTCCCAC CCCTGAAGAT CCCAGGTGGG CGAGGTAATG GTCAACGGGA TCACACTTCT TCATCTCGCC CGCTCGACTC CGACTTGACG GTGACAGCGG AGCCGGCGGG GAACGGTCGC CCCGGGATAC TCCACTTCCA GAGCCGCCTC ACCGTTTCCA GGGTGATCAA CTGGGACGCG GTGCTGAGTG GGAATGCTCT GTATGTGGAG ATACCCATAG ACCCCCTCCC CGAGGGCAGC AAGGAGAGTT TTGCGGCTCT TTTGGAGTAT GCAGAAGAAA ACCTTAAAGT TGTCCGCGTG TTCGTCTGCT TTTACAAGAA CAGAGATGAT CGTGCTAAAC TTGTGCGCAC ATTCAGCTTT CTGGGCTTTG AGATAGTGAA ACCGGGCCAT GCCGTTGTCC CGCCTCGACC TGACGTTTTC TTCATGGCCT ACAACTTCGA CAGGGACTCT TCCTCCGATG AGGATTAGCT CTGACCCCTG TGGGGTGTTC CAGGAAGCAG AATCATCATA TTAGCCAGTT AACTTTGATA AGCAGTCAAA TGTCTTGATT TTTAGAAAGC TTAACTTCAA TAT

Product

ProductOAZL_ORF1
DescriptionOrnithine decarboxylase antizyme AZL
Modifications243..245:ribosomal_frameshift
MVKSNLQRIL NSHCFAREKE GKPQCCTAMA DLSNSICDMI GNLSPHCSSS RGPGPLWCSD APLPPLKIPG GRGNGQRDHT SSSRPLDSDL TVTAEPAGNG RPGILHFQSR LTVSRVINWD AVLSGNALYV EIPIDPLPEG SKESFAALLE YAEENLKVVR VFVCFYKNRD DRAKLVRTFS FLGFEIVKPG HAVVPPRPDV FFMAYNFDRD SSSDED

Publication