Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200867"

Accession numberr200867 [export]
Locus nameAZ
DescriptionOrnithine decarboxylase antizyme AZ
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismBranchiostoma floridae [details]

Sequence

GenBank IDsBW694008.1,BW711241.1,BW711714.1,BW738254.1,BW780988.1,BW877741.1,BW889896.1
SequencemRNA of 745 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 289)
DescriptionThe sequence seems incomplete, 3' of the CDS is missing; AZ ORF0: 1.3e-34 ORF1: 2.5e-99
ACAGCACAGN TCGTCCGTCT TCGTGGAAGA AGAGGAAAGT CAGCGTCTCA AGCCTGTTTT TCCAGTTTTT TCGTAACTCC TACGTTTATT TTAAGGCTTC AAGCCCAACC GGCAAGCCTT ATGTTACTTA CCGCCCTAGA GAGAAGTAAT AACAGTCAAA ATTGCGTCGA AAAAGAAACG AAAAAAGAAA ACAGAAACAT GCCTACCAAA CGGGACAACC AAACAACTCT CATACGACTG CCCCAAGACT GCTGCTCAAC CCCTACCGGT GGGGCCGGGT GGTGCTCCTG ATGTTCCTTC AGGCGAGACA GACTGGGGAG GGGAGGGGGT CAGCGCAGAG GAGGACGGCC ACGGAGCGTT CGCGCAACGT GTCTTTGGGG ATGGGCTGAC CCAGTACAGC AGTGAGCTCC AGTCCCTACG TTTCCAGTCG CGACTCACCG ACTCGCGGCT TGTGGAGTGG CAGGCCGTCC TCTGGCGCAG CGTACTATTG GTGGAGATCC CCGCAGGCAT CCTGCCAGAT GGCAGCAAGG AGAGTTTTGT CAACCTCCTT GACTATGCGG AGGAGCAACT CCAGTGTGAG ACCGTGCTGA TCTGTTTCAA GAAGGACCGA ANCGACCGCA CCTCCCTGAT CCGAGTCTTC ATGTTCATGG GGTTANAGGT CGTGGCCCCA GGTCACCCTG ACATCCCCGA CAATCCTGAT TACTTCTTCA TGGCCTACAC CATTGACTAN ACTGGCCTGA TCACC

Product

ProductOAZC_ORF1
DescriptionOrnithine decarboxylase antizyme AZ
Modifications288..290:ribosomal_frameshift
MLLTALERSN NSQNCVEKET KKENRNMPTK RDNQTTLIRL PQDCCSTPTG GAGWCSDVPS GETDWGGEGV SAEEDGHGAF AQRVFGDGLT QYSSELQSLR FQSRLTDSRL VEWQAVLWRS VLLVEIPAGI LPDGSKESFV NLLDYAEEQL QCETVLICFK KDRXDRTSLI RVFMFMGLXV VAPGHPDIPD NPDYFFMAYT IDXTGLIT

Publication