Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200873"

Accession numberr200873 [export]
Locus nameAZ
DescriptionOrnithine decarboxylase antizyme AZ
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismMeloidogyne chitwoodi [details]

Sequence

GenBank IDsCD682409.1
SequencemRNA of 487 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 63)
DescriptionThe sequence seems incomplete, 5' of the CDS is missing; The position of the initiation codon is not identified; AZ ORF0: 0.046 ORF1: 2.3e-62
TGAGTAGTAC ACCGTTAAGT AATTGTTGTA GTCCCGGTTT TCCCCCCCTC ACGTGTTGCT CCTGACGTCC CTAACGATGA AAATATAGAT AGAGATGCCA TTGCACGTAT AGTAAAAGGT GTAGGTGAGG GGTGGTGTTG TCATTTGGCC GATAACTCAA TTGCTTTATT CGTTCCACCA AAATTGTTTA ACATCACTTT ATCGCGTGAA CATTTCGTCA ATCTTCTTGA GTATTGCTTT GATCGGCTCA AAGTAAAGCG CGTTTTGGCT TGTTTTGAAA AATCTGAGAT TGATCCACGC GAAGGAATTC CACGCGCTCT TAAATGCATT GGTTTCTCCG TTTTACCACC AAATCGTTTT CCAAATTGGC TTGATCCGAA AACAACCTTT GCAATGGTAT ATTCTATCTA AACATGGACA CATCTAAAAG CCGTATTGGA AAAATGATTA CCTTTTTACC CCTCTCTATA CACATATATC TTTTGCA

Product

ProductOAZN_ORF1
DescriptionOrnithine decarboxylase antizyme AZ
Modifications62..64:ribosomal_frameshift
SSTPLSNCCS PGFPPLTCCS DVPNDENIDR DAIARIVKGV GEGWCCHLAD NSIALFVPPK LFNITLSREH FVNLLEYCFD RLKVKRVLAC FEKSEIDPRE GIPRALKCIG FSVLPPNRFP NWLDPKTTFA MVYSI

Publication