Recode v. 2.0 / Database of translational recoding events.
Details for "r200877"
| Accession number | r200877 [export] |
| Locus name | OAZ2 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Recode status | Reviewed |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Macaca fascicularis [details] |
Sequence
Recoding event
| Event type | +1 Frameshifting (position: 266) |
| Description | The sequence seems incomplete, 3' of the CDS is missing; OAZ2 ORF0: 7.1e-23 ORF1: 1.7e-96 |
GAGGATTCCT CGAGCCTGTT GGCCTACTGG AGTTGGAGGC AGGCGCTCGC TGAGGCAGGA GGAGGTGCTC
GGTCCGCGGC CTGACAGGGA CTTAGCCCGC AGAGATCGAC CCCGCGCGCG CGCGACCCCA CACCCACCCA
CTCATCCACC CTGAGCAGAG CCGCCGAGGA TGATAAACAC CCAGGACAGT AGTATTTTGC CTTTGAGTAA
CTGTCCCCAG CTCCAGTGCT GCAGGCACAT TGTTCCAGGG CCTCTGTGGT GCTCCTGATG CCCCTCACCC
ACTGTCGGAG ATCCCCGGTG GGCGAGGGGG CGGCAGGGAT CCTTCTCTCT CAGCTCTAAT ATATAAGGAC
GAGAAGCTCA CTGTGACCCA GGACCTCCCT GTGAATGATG GAAAACCTCA CATCGTCCAC TTCCAGTATG
AGGTCACCGA GGTGAAGGTC TCTTCTTGGG ATGCAGTCCT GTCCAGCCAG AGCCTGTTTG TAGAAATCCC
AGATGGATTA TTAGCTGATG GGAGCAAAGA AGGATTGTTA GCACTGCTAG AGTTTGCTGA AGAGAAGATG
AAAGTGAACT ATGTCTTCAT CTGCTTCAGG AAGGGCCGAG AAGACAGAGC TCCACTCCTG AAGACCTTCA
GCTTCTTGGG CTTTGAGATT GTACGTTCAG GCCATTCCTG TGTCCCCTCC TGGGCAGATG TGAATGTCAT
GGGTTATCCC CTGACCAGAA CTTGTCCGAT GAGGACTAAT AGTCATAGAA GATGCTTTGC CCAAGAAGCC
ACAGTGGGGG AAGAGGGAAA GTTAGGCAAC CCTGGGCCAG CCAAAAGGGT
Product
| Product | OAZ2_ORF1 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Modifications | 265..267:ribosomal_frameshift |
MINTQDSSIL PLSNCPQLQC CRHIVPGPLW CSDAPHPLSE IPGGRGGGRD PSLSALIYKD EKLTVTQDLP
VNDGKPHIVH FQYEVTEVKV SSWDAVLSSQ SLFVEIPDGL LADGSKEGLL ALLEFAEEKM KVNYVFICFR
KGREDRAPLL KTFSFLGFEI VRSGHSCVPS WADVNVMGYP LTRTCPMRTN SHRRCFAQEA TVGEEGKLGN
PGPAKR
Publication
- Bekaert M, Ivanov IP, Atkins JF, Baranov PV. (2008) Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinformatics. 9(178). [abstract]