Recode v. 2.0 / Database of translational recoding events.
Details for "r200893"
| Accession number | r200893 [export] |
| Locus name | OAZ1 |
| Description | Ornithine decarboxylase antizyme OAZ1 |
| Recode status | Reviewed |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Leucoraja erinacea [details] |
Sequence
Recoding event
| Event type | +1 Frameshifting (position: 297) |
| Description | OAZ1 ORF0: 3.1e-23 ORF1: 3.4e-112 |
CTGGCCCTGC GTTGCGCGTC AGGCGGCGAC TCCTACACAA CCCAACCCCC TCTCCTCCTC CGTTCACACC
AGCGCGCTGC CACCACACAG CCTTTCAGCT GGTGTCCCGT GGAGCAACCT AAGGCCGGAT GGTCAAGATC
TCCCTCCAGC GCATTTTGAA TAGTCACTGT TTTGCTAGAG AAAAAGAAGG AAACAAAATG CCCTCCATGA
CGTTTAGTAG TAATACTAGT ACCGAAAGCT CCAGGATGTC CTCCACTTCC TGTCGTAACC CTGGTCCGGG
GCCTCTGTGG TGTTCCTGAT GTCCCTCACC CACCCTTGAA GATCCCAGGT GGGCGAGGGA ATGCTCAAAG
GGATCACAAT CTTGCAGCTA ATGTACTGTA TTCAGATAAT CGGTTGAGTG TAACAGAAGA TTTGAGTGCA
AGCAGCAGGA CTAAAATACT TCACTTCCAG TCCAAGCTTA CTGATACAAG AATTGTTCAC TGGAGAACTG
TACTGAACAA CAACAATCTG TATATTGAAC TCCCAGGTGG GGCATTGCCT GAAGGAAGCA AAGAAAGCTT
TACCATCCTG CTTGAATTTG CTGAAGAACA TCTTCACGTT GAACATGTCT TCATTTGCTT CAACAAGAAC
AGGGACGATC GAGCTCCACT ACTTCGCACA TTTAGCTTTC TTGGCTTTGA GATTGTGAGA CCTGGGCATC
CCCTTGTCCC AAAAAGACCA GACGCTTTCT TCATGATGTA TACATTTGAA AGAGACTCAT CTGATGAAGA
ATAAACGTGT GCTTTTATCT TAGCGCTTTG AT
Product
| Product | OAZ1_ORF1 |
| Description | Ornithine decarboxylase antizyme OAZ1 |
| Modifications | 296..298:ribosomal_frameshift |
MVKISLQRIL NSHCFAREKE GNKMPSMTFS SNTSTESSRM SSTSCRNPGP GPLWCSDVPH PPLKIPGGRG
NAQRDHNLAA NVLYSDNRLS VTEDLSASSR TKILHFQSKL TDTRIVHWRT VLNNNNLYIE LPGGALPEGS
KESFTILLEF AEEHLHVEHV FICFNKNRDD RAPLLRTFSF LGFEIVRPGH PLVPKRPDAF FMMYTFERDS
SDEE
Publication
- Bekaert M, Ivanov IP, Atkins JF, Baranov PV. (2008) Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinformatics. 9(178). [abstract]