Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200900"

Accession numberr200900 [export]
Locus nameAZL
DescriptionOrnithine decarboxylase antizyme AZL
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismLipochromis sp. [details]

Sequence

Variantmatumbi hunter
GenBank IDsDB859357.1,DB860568.1,DB862111.1,DB862372.1,DB864801.1,DB870209.1,DB873104.1
SequencemRNA of 714 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 133)
DescriptionThe sequence seems incomplete, 5' of the CDS is missing; The position of the initiation codon is not identified; AZL ORF0: 6.3e-24 ORF1: 3e-126
GCTCGCGAGA AAGAAGGAAA AACGCAGCCT CTTACTATCA TGGCGAATTT GAGTAGCGGT ATTTGTGACA TGATTGGGAA CCTTTCCCTG CACTGTAGTA GTACCCGCGG CCCGGGGCCT CTGTGGTGCT CCTGATGCCC CTCTCCCACC CCTGAAGATC CCAGGTGGGC GAGGGAATGG CACACGGGAT CACACTCCTT CAGCTCGACT GCTCTACTCA GATCGAAAGT TGACTGTAAC GGAGGAACCG CCAGGGAACG GTCGCCCTGG GATACTCCAC TTCCAAAGTC GTCCTACCGT TACTAAGACA ATACAGTGGG ATGCTGTCCT AAGCAGCAGT GCACTCTACG TGGAGATACC TCTGGACCCT CTTCCTGATG GCAGCAAGGA GAGTTTCGCA GCTCTCTTGG AGTATGCTGA AGAACATCTG AAAGTCGTTA GCGTGTTTGT CTGCTTTTAC AAGAACAGAG ATGATCGTGC TAAACTGGTG CGTACCTTCA GTTTCCTGGG CTTTGAGATT GTGAAACCAG GCCATGCCCT CGTCCCACCT CGACCCGACG TTTTCTTCAT GGCCTACAAC TTTGACAGGG ACTCCTCAGA CGAGGAGTAG CCCGCCGGAC AACCTCCCCT GCTTACGTCT TTTGTTTTCC TTACTATTGT ATGGNTTCCC CCATTCAGTC GCAGCTTACT CACATACCGT CTGTGTTAAA CCCT

Product

ProductOAZL_ORF1
DescriptionOrnithine decarboxylase antizyme AZL
Modifications132..134:ribosomal_frameshift
AREKEGKTQP LTIMANLSSG ICDMIGNLSL HCSSTRGPGP LWCSDAPLPP LKIPGGRGNG TRDHTPSARL LYSDRKLTVT EEPPGNGRPG ILHFQSRPTV TKTIQWDAVL SSSALYVEIP LDPLPDGSKE SFAALLEYAE EHLKVVSVFV CFYKNRDDRA KLVRTFSFLG FEIVKPGHAL VPPRPDVFFM AYNFDRDSSD EE

Publication