Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200909"

Accession numberr200909 [export]
Locus nameAZ
DescriptionOrnithine decarboxylase antizyme AZ
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismAphis gossypii [details]

Sequence

GenBank IDsDR389535.1,DR390176.1,DR391827.1,DR395089.1
SequencemRNA of 690 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 47)
DescriptionThe sequence seems incomplete, 5' of the CDS is missing; The position of the initiation codon is not identified; AZ ORF0: 0.00066 ORF1: 1.4e-88
CTCGCAATAC TCCATCTCTC TTTGCCCTGG GCCTCAGTGG TGGTCCTGAT GTCCCCCATG CCGCAATTGT AGCCAAACGC AACAGAGAGG GCAGCAGCGG CATGGGCAAG CTTATTCAAT CGGAGCTCTC TGTACTGGAA TCACAACCAG TGCATGAATT CGAACTTTTG GAGGACGTCA AGAATCATTA CGCGGTACGG ATTACGTTTG GGATGCAGAT CACAGCTGAC GTGGACATAC AATGGGATAC AATATTGTCC GGTCGTAAGC TCTACATTCA GGTGGCAGAT GCACAAAGAC CAGTTGGATC AAAAGAAGGT TTTTTGGCCA TGCTAGAATA TGCGGAAGAA TATTTAAATG TATCTCATAT CATTGTCTGC TTTGCTAAGA ATCATCCTGA ACGTAATGTA CTGGTCAGAG GTTTCATGTT TTTGGGATTC TCGTTACAAC CTCCAGGGCT CAACAAGATT GTACCACATG CTGCTATTGA TAACTATAAC CATTACATGG TGTACGATGT CGAATCATAA TTTCATTAAG TTTCTATTAT TCTTGAAAGT ATAAAAATAT AAAAACAATT TCAAAATTAT AAGTATATAA ACTAGGATAT AGTTGAATTC GATTGTCAAT GCTGCCACTA GCCCTCTTTG TTGCTCCTTA ACATTATTAT TATTAAATGT GTAAATTGAT

Product

ProductOAZA_ORF1
DescriptionOrnithine decarboxylase antizyme AZ
Modifications46..48:ribosomal_frameshift
SQYSISLCPG PQWWSDVPHA AIVAKRNREG SSGMGKLIQS ELSVLESQPV HEFELLEDVK NHYAVRITFG MQITADVDIQ WDTILSGRKL YIQVADAQRP VGSKEGFLAM LEYAEEYLNV SHIIVCFAKN HPERNVLVRG FMFLGFSLQP PGLNKIVPHA AIDNYNHYMV YDVES

Publication