Recode v. 2.0 / Database of translational recoding events.
Details for "r200927"
| Accession number | r200927 [export] |
| Locus name | OAZ2 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Recode status | Reviewed |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Macaca nemestrina [details] |
Sequence
| GenBank IDs | EB526566.1 |
| Sequence | mRNA of 818 nucleotides [sequence] |
Recoding event
| Event type | +1 Frameshifting (position: 237) |
| Description | OAZ2 ORF0: 7.1e-23 ORF1: 1.2e-112 |
ATTACCCGGG ATCGGCCCGC GGCCTGACAG GGACTTAGCC CGCAGAGATC GACCCCGCGC GCGCGACCCC
ACACCCACCC ACTCATCCAC CTATCCACTC CCTGCGCCGC CTCCTCCCAC CCTGAGCAGA GCCGCCGAGG
ATGATAAACA CCCAGGACAG TAGTATTTTG CCTTTGAGTA ACTGTCCCCA GCTCCAGTGC TGCAGGCACA
TTGTTCCAGG GCCTCTGTGG TGCTCCTGAT GCCCCTCACC CACTGTCGAA GATCCCCGGT GGGCGAGGGG
GCGGCAGGGA TCCTTCTCTC TCAGCTCTAA TATATAAGGA CGAGAAGCTC ACTGTGACCC AGGACCTCCC
TGTGAATGAT GGAAAACCTC ACATCGTCCA CTTCCAGTAT GAGGTCACCG AGGTGAAGGT CTCTTCTTGG
GATGCAGTCC TGTCCAGCCA GAGCCTGTTT GTAGAAATCC CAGATGGATT ATTAGCTGAT GGGAGCAAAG
AAGGATTGTT AGCACTGCTA GAGTTTGCTG AAGAGAAGAT GAAAGTGAAC TATGTCTTCA TCTGCTTCAG
GAAGGGCCGA GAAGACAGAG CTCCACTCCT GAAGACCTTC AGCTTCTTGG GCTTTGAGAT TGTACGTCCA
GGCCATCCCT GTGTCCCCTC TCGGCCAGAT GTGATGTTCA TGGTTTATCC CCTGGACCAG AACTTGTCCG
ATGAGGACTA ATAGTCATAG AGGATGCTTT GCCCAAGAGC CACAGTGGGG GAAGAGGGAA GTTAGGCAGC
CCTGGGACAG GCGAGAGGGC TCCTCGCTGT CTAGGGAAGA CACTGAGG
Product
| Product | OAZ2_ORF1 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Modifications | 236..238:ribosomal_frameshift |
MINTQDSSIL PLSNCPQLQC CRHIVPGPLW CSDAPHPLSK IPGGRGGGRD PSLSALIYKD EKLTVTQDLP
VNDGKPHIVH FQYEVTEVKV SSWDAVLSSQ SLFVEIPDGL LADGSKEGLL ALLEFAEEKM KVNYVFICFR
KGREDRAPLL KTFSFLGFEI VRPGHPCVPS RPDVMFMVYP LDQNLSDED
Publication
- Bekaert M, Ivanov IP, Atkins JF, Baranov PV. (2008) Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinformatics. 9(178). [abstract]