Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200933"

Accession numberr200933 [export]
Locus nameAZ
DescriptionOrnithine decarboxylase antizyme AZ
Recode statusReviewed

Organism

Genomic classEukaryota (Chromosome)
OrganismLentinula edodes [details]

Sequence

GenBank IDsEB012288.1,EB012376.1,EB015471.1,EB016282.1,EB017645.1
SequencemRNA of 874 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 247)
DescriptionThe sequence seems incomplete, 3' of the CDS is missing; AZ ORF0: 9.1e-45 ORF1: 1.5e-128
TACAAACCCC CAAACTCATA CTTAAGAATT TCTTCACCGC AATCAAGTTG GCATATGTCG TTGAAAAACA ATTCGAATTT ATCCAATCAA AGATTTAGTC TTTGCCCCAC CAACGGCCGT CAAACCGTTG GAGATGGGGC TGTAACTCTC GACACTCCTA GTGTGCTTGC TGTGTGCCAG ATGCAGGGCA CTGATGACAT GTACTACTAT TCTACTACGT TCTCTGGCGG GCCCGGGTGG CGCTTTTGAC ACACCCAAAG CAAAATGCCC TCCTGACCGA GGGTCGTCGG AATGTGTGAC AGGCATCCCG GCGCCACTTA CCCCCAATCT CTCCATATCT TCTTCTCCCG AATCCTACTA TACTTCTGCA TATCCTAAGC AGCACACATA TGTTCGCGGT TCTTTTCCTT TCCCAAAAAC CTCAGTTGGA CCTTGCGCTA TCCCAGCTCG AACCAGCAGT GGTAGCTCTG AATCATCTAC ACCTCCCCTC ACTCCTGATG ACGGTAGTGA CTGTAGCGAT CGTAGCATCT CTCCCTCTTT GATGCAGCAG AAGGATGCCA TGGACTTTCT TATGACGCTT TTCCCAACTG GTCTTGGAGC TCTTCCTTAT GCGAAGAGTA TCTCCATTTC GGCCCCGAAC ATGGGTTCAG CTTTCAACGG AATGGTCCTT GAACTACCTG GAAAACCCAG AACACTCTAC GTGGACGCAA AGAACGCAGA GAGCGTCAGC CTCAGAGAAA GCGTCGTCGC ACTTTTGGAT CTTGCGGACG ACCAGCTGGA GTGCTCTGCT CTCGTGATTG TTCTGGAACG GTCGTCACCG GCCCTGGGAG AAATTCTGCA TTCTCTCATG TATGTAGGTG GCTCGGTCGT CACT

Product

ProductOAZF_Basidiomycota_ORF1
DescriptionOrnithine decarboxylase antizyme AZ
Modifications246..248:ribosomal_frameshift
MSLKNNSNLS NQRFSLCPTN GRQTVGDGAV TLDTPSVLAV CQMQGTDDMY YYSTTFSGGP GWRFDTPKAK CPPDRGSSEC VTGIPAPLTP NLSISSSPES YYTSAYPKQH TYVRGSFPFP KTSVGPCAIP ARTSSGSSES STPPLTPDDG SDCSDRSISP SLMQQKDAMD FLMTLFPTGL GALPYAKSIS ISAPNMGSAF NGMVLELPGK PRTLYVDAKN AESVSLRESV VALLDLADDQ LECSALVIVL ERSSPALGEI LHSLMYVGGS VVT

Publication