Recode v. 2.0 / Database of translational recoding events.
Details for "r200947"
| Accession number | r200947 [export] |
| Locus name | OAZ2 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Recode status | Reviewed |
Organism
| Genomic class | Eukaryota (Chromosome) |
| Organism | Meleagris gallopavo [details] |
Sequence
Recoding event
| Event type | +1 Frameshifting (position: 236) |
| Description | OAZ2 ORF0: 3.4e-22 ORF1: 2.7e-113 |
TTATTTTGAC TGATAGTGAC CTGTTCGTTG CACAAATTGA TGAGCAATGC TTTTTTATAA TGCCAACTTT
GTACAAAAAA GTTGGGAGGG AGGAGGTGCG GAGCCGAGCG GAGCGGAGCC TAGCCGGAGG CAGCCGAGGA
TGATAAACAC CCAGGACAGT AATATTTTAC CTTTGAGTAA CTGTCCCCAG CTGCAGTGCT GCAGGCACAT
CGTTCCGGGG CCTCTGTGGT GCTCCTGATG CCCCTCACCC ACTGTCGAAG ATCCCCGGTG GGCGAGGGGG
TAGCAGGGAT CCTTCTCTTT CAGCTCTGAT TTACAAGGAT GAGAAGATCA CTGTTAGCCA AGATGTCCCG
GTGCACGAAG GGAAGCCTCA TGTTGTCCAC TTCCAGTACA AGGTCACAGA GGTGAAGACT TCCTCCTGGG
ATGCAGTGCT TTCGAATCAG AGCCTCTTTG TGGAAATCCC TGATGGGTTA TTAGCTGATG GAAGCAAAGA
AGGGTTATCA GCACTGCTGG AATTTGCTGA AGAAAAAATG AAAGTCAGCT ATGTCTTTAT TTGCTTCAGA
AAAAGCAGAG AAGATAGAGC ACCGCTCCTG AAGACCTTCA GCTTCTTGGG CTTTGAGATC GTGAGGCCTG
GTCACCCCTC TGTCCCATCG CGGCCAGACG TGATGTTCAT GGTGTACCCC CTGGATCAGA ACTCTTCCTC
TGATGAAGAA TAGCTGCGGC GGGGGACCCG AGCGTGACCT GAAAACCTTT TGAGAGGAGA GAGGGTTACA
TCTCCGTTCT TGAGGAAAGG GAAAACAAGC GTTTGTTGAA CTGAAACTGC ATTTCTCATT GTTAGATTGG
CCTGTGTATC CTCAGAGTTG ACTATCTCA
Product
| Product | OAZ2_ORF1 |
| Description | Ornithine decarboxylase antizyme OAZ2 |
| Modifications | 235..237:ribosomal_frameshift |
MINTQDSNIL PLSNCPQLQC CRHIVPGPLW CSDAPHPLSK IPGGRGGSRD PSLSALIYKD EKITVSQDVP
VHEGKPHVVH FQYKVTEVKT SSWDAVLSNQ SLFVEIPDGL LADGSKEGLS ALLEFAEEKM KVSYVFICFR
KSREDRAPLL KTFSFLGFEI VRPGHPSVPS RPDVMFMVYP LDQNSSSDEE
Publication
- Bekaert M, Ivanov IP, Atkins JF, Baranov PV. (2008) Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinformatics. 9(178). [abstract]