Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200972"

Accession numberr200972 [export]
Locus nameahpD-like homolog
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 567 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 280)
ATGACTTGGA TCAGGACTAT TCCTCTCTCG GAAGCGAGTG AAGATTTGCT GCGCGCCATG GAGTCGCAGC GCTCGCTTTA TCCCATTGAA TATGCGACGC CGGTGCATCC GACTGACGAT GGCACTGCCG GTATCGTCGC ATCCCACAGC CTGATTCCTG ATGCTTTGTT TCACGCGTTC GGCACGTTCG GGGCACTGAT GTCGCCGGAG TTGCCGCTCA CGCGCAGGCA GCACGAGATG ATCACCACGA TGGTCTCGGT GACGAACCGG TGCTTCTATT GAATCGAGTC GCACGCAGAG TTTCTGCGTC GGGTGACTCT GGATGACGAA TTCGTAGCAA CGTTGCAACA GGACTACACA AAGGCGCCGC TCTCTGAGCA AGACCGCGCA ATGCTCGACT ACGTGGTGAA ACTCACGAAG GACGCCACGC GTTGCGCGCG CGAAGATCAT GATCGGCTGC GCGCCGTGGG CTTCGATGAC CGCGGGATCC TGCAGATTAC GTTGATCGCG AGCTGGTTCA ACTACATCAA TCGCGTGGCG GATGCACTCG GGGTGGGACG GCAATGA

Product

ProductahpD-like homolog
DescriptionAhpD-like homolog
Modifications280..282,aa:Sec
MTWIRTIPLS EASEDLLRAM ESQRSLYPIE YATPVHPTDD GTAGIVASHS LIPDALFHAF GTFGALMSPE LPLTRRQHEM ITTMVSVTNR CFYUIESHAE FLRRVTLDDE FVATLQQDYT KAPLSEQDRA MLDYVVKLTK DATRCAREDH DRLRAVGFDD RGILQITLIA SWFNYINRVA DALGVGRQ