Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200974"

Accession numberr200974 [export]
Locus nameFdhA
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 3132 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 631)
ATGGCCGCGT CCGAAACGCC CAAGCACGAC GATGTCAACG TCCCGCAAGA TCGCGTTCAG ACAGCTCTCA GCCGTCGCGA TTGGCTGCGG CTCACGATTG GAGCAAGCGC CGGTCTCGCG CTCGGCTCAC TGGTCGACGT GAAGGCTGTG CGTGCCGCGA ATGAGAGTCT AAAACTCTCG AACGTCCGCG AATTTACAAC CTCCTGCAAC TTCTGTTCGT GCGGATGCGG TATGGTCGCG ACCGTGCGCG ACAACAAGCT CATCACTCTC GAGGGCGATT ACGACCACGT CGTAAACGAG GGGTCATTGT GCGTGAAGGG GATGTCTATG TTTCCCACGC ACGCGTCTCC GCAGCGCAAT CAAGTGCCCC GCTATCGAGC TCCCGGGAGC GATCACTGGG AAGACATTAC GTGGGAGGAT GCGGTTGAGC GCATCTCGCA GAAAATCCGC AAGACTCGCG ACACCACTTG GATCGCAAAC GAGAAGGCAG GCGACACCGA AGTCCCAGTG AATCGTACCG ACGCCATCGC CTTCCTAGGC GGCGCCCAAA ATACCAACGA AGAGTGCTAC CTCTTCCAAA AGTTCGCTCG ACTGCTCGGA ACGGCCTACG TGGAACACCA GGCCAGACTT TGACACAGCC CCACCGTCCC CGGTCTGGGG GCATCATTCG GTCGCGGCGC TATGACGAAC CACTGGGCCG ACATGCAGCA TTGCAAGGCG ATCCTGGTGG AAGGCAGCAA CGCAGCCGAA AACCACGTCA TGGCCATGAA GTGGATCCGT AAAGCGCAGG AAAACGGCGC CATCATTATC CACGTGGACC CGCGGTTCAC ACGAACCTCC GCTGGAGCCG ATATTTTCGC CCGCATTCGG CCGGGGGCAG ATGCAGCGTT CTTGAACGCG ATGATTAACC ACATCCTGGA GAACAAACTC TACGATCAGG ATTATGTGGA GACACACACC AATGCTTTGA TGATCGGGAA CGCCGACTTC GACTTCAAAG ACGGCCTGTT CAGCGGATAC GACGAAGAAG GTCACAAGTA CAAAACGGAC ACCTGGGGCT ATCAACTGGA TGGTTCCGGG AAACCACGTC ACGCGACAAG CCTCGACGAT CCCCATTGTG TGTTCTCGAC GCTGCGCAAG TTCTTCGCGC GTTACACGCT CGAAGTCGGC GAGCGCATGT CCGGCATTCC CGCGGCACAG ATCAAGCTGA TTGCCGAGAC CATGGCAAAG CACCGCCCTG GGACGATTCT CTATGCCCTT GGCATGACGC AGCACACGAC TGCTGTCCAA GGCATCCGCG CCTTCACCAT CTTCCAACTT CTTCTCGGAA ATATTGGGAA GCCGGGCGGC GGCGTGAATG CGCTCCGCGG CGAGCCAAAC GTTCAGGGCG CCTGCGACAT GGCGGTTCTG AACAACTACA TGCCGGGCTA TCTCAACTAC CCGGTGCATA CCGAGCCGAC ACTCGCGGCA TGGACCGTGA ACAACGGCAG CTTGCGGCGT AAATATCTGG TCAATACGTT GAAGGCGTTC TACGGCGACG CAGCCACCGC AGAGAACGAG TTCTGCTACG CGTGGCTGCC GAAGCGAAAT AGTGCAAAGG ATTACAGCGC CTACGGAATC TTCGAGAGTG CCCTCGCCGG CAACATGAAG CTGCTGTGGA TCGCGGGTCA AAATCCCGCA GTGAGCTCTC CCAATCTCAA GCTGGTTTTT GAAGCGCTTG GAAATCTGGA AACGCTGGTT GTGCAGGAAT TGTGGGAGAC CGAAACCGCC GCGTTCTGGA AACGCCCCGG AGTTGATCCG AAGTCCGTGA AAACGGAAGT ATTCCTGCTT CCGGCCGCGT TCTTCATGGA GAAGCAGGGC ACCATTACCA ACTCGGGCGC CATGGTGCAG TGGAGATACA AAGCCGTTCC ACCTCCCGGA CAGGCCAAGC CTGATGGCGA AATCGTGGAT ATCGTCTATC GCCGAGTGCG TGATCTGCTG AAGGATTCGA CCGATCCCAA AGACCAAATC GTGAAGCGTG CGTTCTGGAC GTACACCACT CCCGAGGATG TCTTGCGGGA GATCAACGGC CGCGCCCTGC ACGATATTCC AGGCACCGAC CTGAAAGCCG GTACCCTCGC GAGCCGCATC GCCGACCTGA AAGCCGATGG TTCAACCTCT TCTGGCTGCT GGATCTACGC CGGGGTCTTT TCAAAAGGCG AGAACCTCTC GAAGCGGCGT GACCACCGCA CCGACCCCGG CAAACTTGGC CTCTATCCGA ACTTCGGATG GACCTGGCCG AACAACATGC GGGTGCTTTA CAACCGTGCT TCCTGCGATC GCCATGGTAA GCCCTATCCC GGTTCGAAAC CGATCGTATG GTGGGACGAA GAAGCGAAGC GCTGGACTGG CTATGACGTT CCCGATGTGC CGGTAATCAC TGACGGTCCC AACACGCCGA ATGGACAGCG AGCGTTCCAT ATGAATGCCG AGGGCGTAGC GCGCCTCTTC GCTGCCGTTT ACAAGGATCC AGAACCTGCC AGCGATGATC TGTGGCGCGA CGCCAGTTAC GTCCCCAAGG ACGGTCCGCT GCCGGAAATG TACGAACCCG TGGAGAGTCC GGTAGAGAAC CCGATGCACC CGAAGGTGCG GAATAACCCC ATGCTGAAGT ATCCGCGTGT CGGTAGCATC CATCAACCCA TCGGCACCGC GAAAGATTTT CCTTACGTCC TTATGACCTC AACCGTAGCC GAACATTGGT GCGGCGGCTC CACGACTCGC AACAATCCCT GGCTGAACGA GTTGATGCCG GAACCTGTTT GCGAGATCCC AGAGGTCCTA GGGTCGAAGC TTTCCGTTAA ATCCGGTGAC TGGGTGAAGG TCTCGTCGGC TCGAGGAGAA GTTGAAGTGA AGGCTGTCGT CACACCGCGC ATGCAGCCGC TCCAAATCGC GGGACAGCAA GTCATCATTG TCTGGATGCC CTACAACTGG GGCTTCCAGG GCCTCTCCAC TGGCCCGAGT GTGAACCACC TCACAATCGA CGCCGTGGAT CCGGGGGCAG GTACGCAGGA GACGAAAGCG TGTCTCGTAA ATGTCGTCAA GGTTCGTGAC GCCAGCGCAA GGCGTTCCGA TCCCAGAGGG AGGCGCGCAT GA

Product

ProductfdhA
DescriptionFormate dehydrogenase
Modifications631..633,aa:Sec
MAASETPKHD DVNVPQDRVQ TALSRRDWLR LTIGASAGLA LGSLVDVKAV RAANESLKLS NVREFTTSCN FCSCGCGMVA TVRDNKLITL EGDYDHVVNE GSLCVKGMSM FPTHASPQRN QVPRYRAPGS DHWEDITWED AVERISQKIR KTRDTTWIAN EKAGDTEVPV NRTDAIAFLG GAQNTNEECY LFQKFARLLG TAYVEHQARL UHSPTVPGLG ASFGRGAMTN HWADMQHCKA ILVEGSNAAE NHVMAMKWIR KAQENGAIII HVDPRFTRTS AGADIFARIR PGADAAFLNA MINHILENKL YDQDYVETHT NALMIGNADF DFKDGLFSGY DEEGHKYKTD TWGYQLDGSG KPRHATSLDD PHCVFSTLRK FFARYTLEVG ERMSGIPAAQ IKLIAETMAK HRPGTILYAL GMTQHTTAVQ GIRAFTIFQL LLGNIGKPGG GVNALRGEPN VQGACDMAVL NNYMPGYLNY PVHTEPTLAA WTVNNGSLRR KYLVNTLKAF YGDAATAENE FCYAWLPKRN SAKDYSAYGI FESALAGNMK LLWIAGQNPA VSSPNLKLVF EALGNLETLV VQELWETETA AFWKRPGVDP KSVKTEVFLL PAAFFMEKQG TITNSGAMVQ WRYKAVPPPG QAKPDGEIVD IVYRRVRDLL KDSTDPKDQI VKRAFWTYTT PEDVLREING RALHDIPGTD LKAGTLASRI ADLKADGSTS SGCWIYAGVF SKGENLSKRR DHRTDPGKLG LYPNFGWTWP NNMRVLYNRA SCDRHGKPYP GSKPIVWWDE EAKRWTGYDV PDVPVITDGP NTPNGQRAFH MNAEGVARLF AAVYKDPEPA SDDLWRDASY VPKDGPLPEM YEPVESPVEN PMHPKVRNNP MLKYPRVGSI HQPIGTAKDF PYVLMTSTVA EHWCGGSTTR NNPWLNELMP EPVCEIPEVL GSKLSVKSGD WVKVSSARGE VEVKAVVTPR MQPLQIAGQQ VIIVWMPYNW GFQGLSTGPS VNHLTIDAVD PGAGTQETKA CLVNVVKVRD ASARRSDPRG RRA