Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200990"

Accession numberr200990 [export]
Locus nameP3N-PIPO
Descriptionviral protein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow mosaic virus [details]

Sequence

GenBank IDsNC_002990
Sequencess-rna of 7637 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event type-1 Frameshifting (position: 685)
AAAAUAAAAC AACCCUAAAC CAAACAAAAC AAAACAAAAC AAACACAAAC AACACACGCU CCCCAAGCUC AUUACAUUUG UAGAGUGAUC UUUGUCAUCC UACUCUUUGU GAGCUUUUCC GCAAAUCAAC CUGCUUGCUU UUGCGCCCCC UUCACCUUCA CUCUCGCUCC CAUGGAGCAA ACCCUAGCUC AAGCUGUGUC ACGGAGAAAC AAAACAGACA CACCUAUGGC AGAAGAGCGG AAACAUUUCA GCCCCAUGAA UUUUUCCGCA AACUUUGUUG CUCCUGAGCU CUUUUAUAGU GCUAAUGUGA GGAAAAUCAA AAAUAUCUUC AAAGAGCGCA GCACAACUCG GUUUCUGGAC GCGAUUUCAA GUGACUUUGA GCUUGUCGCU UUUCUCACCU UGAGUCCUGC UCAUUUAAUG CAACUUGAAA CAGUUCUGCG CCAAGAGAUG CGUUCGUGCG CUGUGCCAAU UGUCACCUCU GAUGCUAGCU UUGAAACAGU UGCUGUCAUC AAAACCGCUC UGGAUGGCAU GAGAUUUCAC UUUGGAUACA CUACUCUUGA AAAGGGGUGG AUAUCUAUGA UGCGCCAUGC GGAGAGUUGC CUGCAAGAGA GCUCUUCUUC GGCUGUGAAU GAUCUGCAGA CGCCAAUUAA ACGUGUUGGA UCACUGCUCC UGAGUGGAAA AAAUCGCGUA GAAGGCUGCG AACUAUCUGU CUUGAACCUC ACCGCGCGAC GUUUCAGGAU CGAAUAUGGG CUAAAUGGUA CAUACUUUGG CGAACAUGUU GCUAUGCUAC GCGACUUAAA ACGUUAUAUC UAUGGUACCG UACCAAAAGA GUUUUUGUGG GCGAAAACCA AAAAGCACUU ACCGUUCACA AUCCCCGCGU GGAUCACGCG UACGCCCAUC GACUGUUUCU UGUUCUGUCU UCGCGUUAUC CCUAUCUUAC AUAGGUUUGG UGUUGCCAUG UCACUUAUUU ACUUUUCGUG UGUUGCCGCU UUAAAUUUUC CUGCUUUUAU GGGUUUCUUA UUUAAGCGUC AGUUCGCUAA GUAUUUAGCU CACUCUUUUG CUAAACACUC CAUCUACUUU AUGUUUUUAA CUAUAGUUGC UAUUUUAUGG UCUUUCCGCA CUUUUACUUC UCAAAAACCA AAAAUAGUGC UUCAGGCUAG GAGCACAGCA GAAAAAGAGA AAAAGCUUAU GAUGAUUCUA GCUAGUGUCG UUGGGAUCAC UUACCUCUUC GACUACGACA UAGCAGAAGC UCUUGGGAAU UGUCUACAUA AAAUAAGCCG UCUGUCCUCA UAUCUUCUCG ACGACCAUCA AGGCAUUGCA UCACGAAUGU UUGGAGCAAG CUACGGGCUU CAGGCUGGCG ACAGUGCUGA GGAUGCAGUC ACAACGAUAA UCAGCGACUU ACUGUCUGUU ACUUUUAAAA UUGUGGAUGA AGACGCAUCG CAGGGCACCG UGGAGGACGC AUCUGAGACA ACCUUCCACA GUUGGGUUGG UGUUAACACA CUUGCAGGCC GCAAUAUGUC AAGACCACUC CAGUAUAGCG UCAAUAAAAC GUAUGCACUC ACACCUCAAA AUGUCCAGCU CCAAGCGCGA GCUAUGGCAG ACGCUAACAA CUGCUGGUCA AUGGUUGUUG GUCAUACAGG AUCUGGAAAG UCCACAUACU UACCUGUGCA GUACUCCAAC UACUUGUCCA CUAAGAGUGA UAGGCGACAG CAAAUUCUUA UCUGCGAGCC AACUCAGGCU GCCACUGAGA AUGUUUGCGC UGGCGUCGCU GCCAAUCUUG GCAGAGCUGU UUAUGGGCGC CAUGAGGGUU GGUCCAGAAU GGGGGAUCAU UGCAUUCAAG UUAUGACGUA UGGUUCUGCG CUCCAGUGUC ACGCCAUGGA CCCCAGCUUC AUAUCAACUU UCGACGCAAU UUUUCUUGAU GAAGCACACG ACGUUAAAGA GCACUCUCUA GUCUUUGAGA GCAUUUGUGA CACAUUCAAA UCCGUUCGAA AGUUCUAUGU UUCAGCAACU CCCAGAGAUG GCAGUGUUUG UCCUGAAGCA GCUAGGAAAU AUCCUUUACA UGUUGAAACU AGCGUUUGCG AUUCGUAUCG GAAGUUCAUU GCAGCUCAAG GCGGGGGAGA UUUGUUGGAC AUCUCAAAAC AUGACACAGC UUUAGUUUUU CUAGCGGGAC GGCCCGAGUG UAUUAAAGCU GCUAAUGCCU GGAACGCUAG UGUCACUGGU GAGAAGCGCG CCUUUUCCUU GUCGAGCGAC AACUUUGCUA CUGACUUCUC AAUGCUAACU GAGAGGCUCA AAACACACAA AACCAUCAUC UUCACCACGA ACAUAAUUGA AACAGGUGUU ACUCUCAGCG UUGACUGUGU UGUGGAUUUC GGCCACACAA UGCGCCCAUG UUUAGAUCUC AAUCAAAAAU CAUUGCGUCU UGAUCGACGC AAAGUGACGC GGAACGAAAG ACAGCAGAGA AUUGGGCCAA CAGGUCGGCU CAAAGAUGGA UACGCCAUAG UGUGUGGAGA UGUUGAUAGA GCUGUGAACG UCAUCUCUCC UGAUGUUCUU UAUGGAGCUG CUCUUCUGAG UUUUAAACAC AAUGUGCCUU UCUACAUGAA CGAGACAUUU GAGAGUUCCU GGUUGAAGGG UGUUACAAAG GCACAAGCAG ACACAAUGAC AAUCUUCAAG CUUCCCAUAU UUCUAACACG AGAUCUCAUC AAUGCAGAUG GCUCAGUUGC UAAGGAGUUU CUCGAUGUCC UAAAGAAGCA UCAAUUCACA ACAAGCGACA UAAAGCAAGC ACCAAGUAUC ACAGCCAAAC AUAUCUUCCC AACUUGGGCU UCAUACUUCU CUCUCCACCA AGCACUUCAU UAUGGUGAUG ACAAGGAUGA GAUACCACAC GAAUUGCGAU AUGCGCGUGU UCCCUUCUCC GUCACAACUU UGAGCAAAUU CGAUUGGCCU GCCUUAGCUC UUGCAUGUGA GAAACAUAGA GCUUCCAUGU CAAAUGUGUU UGCUGGCAUC GAGGAACCUG CACGCGUUGU CACUCUACAA ACAAAUCCUG CGAACAUCCA AGCGAGCAUC ACACAUUUAA UGCACAUGAG UAAGAACUAC AAAACUCUUA UUGAAAAUAA UCAGCACGUG CGCCAAUCCA UGAUGACGAA UGUCAUGUAU AAGUGGUUCU CUUCCACUCG CAUCACUAAA GAUCUUGAUA GAAACUUGCG AAGAUGCACG GAUAACCUUG CAGUUGUCGA GGCCACGCUC AGCUCACUUA GACAAAUCUU AGCUGGCAAC ACGCAGGUUC AUGCAACGCC ACACAUGCAG AGCACCCUUG AGGAUAUUAU UGGGCUCCAA GCUAGCGACA CACUUACGGA AGAGAGCUUA GCAAGCGCAC UUGGCAUCUU UGUUCCGAAG AGCAACCUCU UUCUGCUGCU AGCUACCAAA GGUUUUAAAC UUGUGUACGU UAUCUGCAUC UUACUUCUUG UGAACCUUGU UUAUAUUGGU CUUCGCAAGU GGCGCGAACA UCUUAAGCAG AAAGGAAGCG AUGAAAUCCU AACUAACACA AUGCCAGUUA GCGAAGGGGG GGAAAUUCUC GCCGAGGUCA UGAAAAUGGA GCCCAAAAUG AGAAAGAACA UCAAGAGGGA UAUGGAUGAA GCCGUUGAGA GCAAACUAUG UGGUUUCACC UUUGUUUUUC CAGAUGAUGA CAAAAUUGGU CUUGAAGGUA AGGGAAACAA GUACCGCCCU CGCGAAGAUG CUCGUCUCAU GUACUCCACU AGGGAAGACG CCACCUUUGA CGCUUGGAAU GAGAAAGCAA AGGAAAGGCG UAAGAAGGUC ACCGACAAAU CUGAGCCAGA GCUUCGCAGA GCCUAUGAAA AGAGACCGUA CUUCAAUUUC UACGACCUUC AAACAGAUAG CAACAUUCUG GAAGCCAUUU UCUACACCAC UGAAGGCGAU GAGUUUUUCC GAACAGCAGA UCCCAAUAAG GACAUGAACU UGGUUGCUGA CAAACUGCGC UCUUUUCUCG ACACAAAGCU UGUUGUUGGA CACCACCAGC GGAAGCUACU AGAAGAAACA GCUCAGGUUG UUAUCAAAGA UACGAAGGGA ACUGCACACA AGAUGGAGAU UUCACAGCAU GAUCCAGACU GUCUAAAGCA GAAUGGGUCC GGCAAAGUUG GAUAUCCAGA ACACCGGGGG CAGUUUCGGC AGGAAGGAGU UGCCAUCACA UCGGAUUACG AUCUUGGAGU UGAGUUUGGC ACCGAUACCG AUAACAUCAC GCUUGAAGCC UCUACUGGGA UAUUAUUGUC ACAAGUCGGG GUCGACGUCG CAACUCGAGU UGGAAGAAUU AGCAUUGGUA CUUUCAACAU GAACUGUUAC UUCUACAACG ACUGGAUUCU GGUUCCGGGA CACCUGCAAG ACAGAUCCGG CAACGUAACA AUUCAAUUUC CUGAUCAAAC AGUGCAAACC ACAACUGAUG CACUCAACGC AAAUGGUGUG AAACGAUUCU AUGGAUUAGA UGUGAUAGCA AUUCGGCGCC CUGCUAUCUU GAGACCUCGC ACCAAGUUGG UCAAAGCUUU UGCUAUUGAG GAACCGGUUA UCGCACAAAU GGUCUUUGUU GACGCACAGG GAGUUCGUAA GUUUACACAA UCUGAUUGGG CCAGAAAGGG GGAGAAUUCC GGGCGUUGGU CGCACAAGAU UUCCACUGUU CUUGGCAUGU GUGGAUGCCA GUUUUGGACG UUGGAAAGAC AGAUUGAUGG AAUCCAUGUU GCCACAAACU ACACAAAGAA GCGCAACGAG UUCCAACCCU UCACUCAGGA GGUCGUUGAU UUUAUAAAUG GACCUGGAAC AAAGAUCCCC UACUGCCCAU GGGUAUUCGA UAGACCGGCU UGUGGGUAUG CAUCCCACAC AGCUUUGUUC GAGAAACCAA CCACACUAAC UGACGUCAUU CACAUGCAAG CUUCUGAUGG UUUGCACAAC AUCAACAAUG CCAUUGAGGG UUUUGGGAGC UCACUGAGGG GUCAGCUCGU GUCACCACCC ACUGAAUCCA CCAGGCAACG UUUCGAUAAG CUGUUUGGUA GUGGCAGCUU UGAGCUCAUU GGGCAAAUGA ACAAAGGCUU AAUCGACAAG CACGUGAUUG UUGGGGAAAA UGAUGAUGUU UACGACUUCA UGCGUGAGCA CCCAACAUUU ACUUGGUUGA AAGAUUUCAU GAAUGAGUAU GCGCCUAGUG UUUUGUCUUA CUCUGCUUAC UACAAAGAUC UUUGCAAGUA UAAUCGUGCA AAACACGUGC UCACUUACAA CCCAGAAGAG CUCCAUUAUG CGACGAAAGG ACUGAUCAAG AUGUUGGAAG ACGCUGGCUU GACACAAGGC AGUGUGAGGA CACCCCAACA AGUCAUUUCG GACAUUCAAU GGAACACUUC CGCUGGACCG AGCUAUCAAG GAAAGAAACG CGACCUCUGU GCCCAUUUGA GUGAUGAUGA GGUGCUGCAU CUCGCUGAGG UGUGUCGCCA ACAAUUUCUC GAGGGCAAGU CAACCGGAGU AUGGAAUGGU UCUUUGAAAG CUGAGUUGAG AACCAUCGAG AAAGUUGAGC CGGAGAAAAC GCGUGUUUUC ACAGCCUCUC CCAUAACAAG CUUGUUUGCU AUGAAAUUCU ACGUUGAUGA UUUUAACAAG AAGUUCUACG CUACCAAUCU GAAAGCCCCC CAUACUGUUG GCAUCAAUAA GUUCGGUAGG GGAUGGGAAA GAUUGCAUGA UAAGCUUAAU CGCCCUGGAU GGUUGCACGG CAGUGGAGAU GGUUCUAGGU UCGACAGCUC UAUCGAUCCU UUCUUCUUCG ACGUUGUGAA AACUAUUCGC AAGCACUUUC UCCCUUCUGA GCAUCACAAA GCCAUUGAUC UCAUAUAUGA UGAGAUUCUC AACACAACCA UCUGCCUAGC UAAUGGGAUG GUCAUCAAGA AGAAUGUUGG AACACAGCGG CAGCCUAGCA CUGUUGUCGA UAACACACUU GUGCUUAUGA CUGCAUUUCU CUACGCAUAC AUUCACAAAA CAGGAGACCG CGAAUUGGCC UUGCUAAACG AGCGUUUCAU CUUUGUUUGC AAUGGCGAUG ACAACAAGUU UGCCAUAUCU CCACAGUUUG ACGAAGAGUU UGGGCAUGAU UUUUCCCCAG AACUUGUUGA ACUUGGACUC ACGUACGAAU UUGAUGACAU CACUAGCGAC AUUUGCGAGA AUCCUUAUAU GUCCCUCACC AUGGUGAAAA CCCCUUUUGG CGUUGGUUUU UCUCUUCCCG UGGAAAGAAU CAUAGCCAUC AUGCAAUGGU CCAAGAAAGG GGGAGUUCUG CACUCAUAUU UGGCUGGCAU UUCCGCAAUU UACGAGUCCU UCAACACACC AAAACUUUUC AAAUCAAUCU AUGCAUAUCU UCUUUGGCUC ACUGAGGAGC ACGAAGCAGA AAUUCUCGCA GCCAUGACUC AAUCCUCAAC UGCUCUUCCC AUACCAUCAA UGCUCGAUGU UUAUCGGUUG CAUUAUGGUG AUGAUGAAAU UUGGCUACAA GCUGCUGACC CUCUCACUGA UGCGCAAAAA GAAGCUGCAC ACACUGCUGC AGCUGAUAGA GCACGCCUCG ACCUAGCCGA UGCUGAUCGU AGACGUAAAG UUGAGGCCGA CCGUGUGGAA GCGGCAAGAG UCAAAAAGGC AGCUGAUGCU GCACUAAAAC CAGUUAACCU CACAGCAACA CGCAUGCCCA CAGAAGAUGA UGGCAAACUU AAAACACCAU CUGGCGCUAG AAUACCAUCA UCAGCUGCAG AUGGUAACUG GAGCGUGCCA GCAACGAAGC AAGUUAACGC UGGUUUGACA CUUAAAAUUC CCCUGAAUAA GCUCAAAAGU GUACCCAAGU CUGUUAUGGA GCAUAACAAC UCAGUUGCAC UCGAAUCUGA GCUAAAAGCC UGGACUGAUG CUGUGCGCAC AAGUUUAGGU AUCACAACUG AUGAGGCAUG GAUCGAUGCC CUCAUUCCCU UCAUCGGAUG GUGCUGCAAU AAUGGCACCU CAGACAAGCA UGCUGAGAAU CAAGUAAUGC AAAUUGACAG CGGAAAGGGA GCUGUCACAG AGAUGAGUCU GUCCCCAUUU AUUGUUCAUG CUCGAAUGAA UGGUGGACUC CGAAGGAUCA UGCGCAACUA CAGUGAUGAA ACCGUCUUAC UCAUCACAAA CAACAAACUA GUUGCACAUU GGUCAAUGAA GCAUGGCGCU UCUGCAAACG CAAAAUACGC UUUCGAUUUC UUCGUCCCAC GAUCAUGGAU GAACCCACAG GAUAUCGAAG UGUCAAAGCA AGCGCGCUUA GCAGCACUUG GAACUGGAAC GUAUAACACC AUGUUAACUU CCGACACUAC CAAUCUGCGU AAGACAACCA ACCACAGGGU UCUGGACUCA GAUGGACACC CAGAACUAAC CUAAACCAUC ACCCCGUGCC UUAUACAUCA CCCACCCCCG CUCAUAAUUC AGUCUUUAAA UUAUGUUCGU GACGUCUUUG UAUCAGGCUC GGAACGGUUC UAUGAUCCAU AUGCCUUUGG CAGUUACAAU GUCAGCAUUC UCAUUGAGGA GUAUGACAGC GUUUGAUCAG CCGUUUUCAA UCAUCCGUCG UUGGAUGGUG GUGCACUUAG UGCACUUACG AGUACCAGAA GGUAAUG

Products

Productpolyprotein
Descriptionpolyprotein
MEQTLAQAVS RRNKTDTPMA EERKHFSPMN FSANFVAPEL FYSANVRKIK NIFKERSTTR FLDAISSDFE LVAFLTLSPA HLMQLETVLR QEMRSCAVPI VTSDASFETV AVIKTALDGM RFHFGYTTLE KGWISMMRHA ESCLQESSSS AVNDLQTPIK RVGSLLLSGK NRVEGCELSV LNLTARRFRI EYGLNGTYFG EHVAMLRDLK RYIYGTVPKE FLWAKTKKHL PFTIPAWITR TPIDCFLFCL RVIPILHRFG VAMSLIYFSC VAALNFPAFM GFLFKRQFAK YLAHSFAKHS IYFMFLTIVA ILWSFRTFTS QKPKIVLQAR STAEKEKKLM MILASVVGIT YLFDYDIAEA LGNCLHKISR LSSYLLDDHQ GIASRMFGAS YGLQAGDSAE DAVTTIISDL LSVTFKIVDE DASQGTVEDA SETTFHSWVG VNTLAGRNMS RPLQYSVNKT YALTPQNVQL QARAMADANN CWSMVVGHTG SGKSTYLPVQ YSNYLSTKSD RRQQILICEP TQAATENVCA GVAANLGRAV YGRHEGWSRM GDHCIQVMTY GSALQCHAMD PSFISTFDAI FLDEAHDVKE HSLVFESICD TFKSVRKFYV SATPRDGSVC PEAARKYPLH VETSVCDSYR KFIAAQGGGD LLDISKHDTA LVFLAGRPEC IKAANAWNAS VTGEKRAFSL SSDNFATDFS MLTERLKTHK TIIFTTNIIE TGVTLSVDCV VDFGHTMRPC LDLNQKSLRL DRRKVTRNER QQRIGPTGRL KDGYAIVCGD VDRAVNVISP DVLYGAALLS FKHNVPFYMN ETFESSWLKG VTKAQADTMT IFKLPIFLTR DLINADGSVA KEFLDVLKKH QFTTSDIKQA PSITAKHIFP TWASYFSLHQ ALHYGDDKDE IPHELRYARV PFSVTTLSKF DWPALALACE KHRASMSNVF AGIEEPARVV TLQTNPANIQ ASITHLMHMS KNYKTLIENN QHVRQSMMTN VMYKWFSSTR ITKDLDRNLR RCTDNLAVVE ATLSSLRQIL AGNTQVHATP HMQSTLEDII GLQASDTLTE ESLASALGIF VPKSNLFLLL ATKGFKLVYV ICILLLVNLV YIGLRKWREH LKQKGSDEIL TNTMPVSEGG EILAEVMKME PKMRKNIKRD MDEAVESKLC GFTFVFPDDD KIGLEGKGNK YRPREDARLM YSTREDATFD AWNEKAKERR KKVTDKSEPE LRRAYEKRPY FNFYDLQTDS NILEAIFYTT EGDEFFRTAD PNKDMNLVAD KLRSFLDTKL VVGHHQRKLL EETAQVVIKD TKGTAHKMEI SQHDPDCLKQ NGSGKVGYPE HRGQFRQEGV AITSDYDLGV EFGTDTDNIT LEASTGILLS QVGVDVATRV GRISIGTFNM NCYFYNDWIL VPGHLQDRSG NVTIQFPDQT VQTTTDALNA NGVKRFYGLD VIAIRRPAIL RPRTKLVKAF AIEEPVIAQM VFVDAQGVRK FTQSDWARKG ENSGRWSHKI STVLGMCGCQ FWTLERQIDG IHVATNYTKK RNEFQPFTQE VVDFINGPGT KIPYCPWVFD RPACGYASHT ALFEKPTTLT DVIHMQASDG LHNINNAIEG FGSSLRGQLV SPPTESTRQR FDKLFGSGSF ELIGQMNKGL IDKHVIVGEN DDVYDFMREH PTFTWLKDFM NEYAPSVLSY SAYYKDLCKY NRAKHVLTYN PEELHYATKG LIKMLEDAGL TQGSVRTPQQ VISDIQWNTS AGPSYQGKKR DLCAHLSDDE VLHLAEVCRQ QFLEGKSTGV WNGSLKAELR TIEKVEPEKT RVFTASPITS LFAMKFYVDD FNKKFYATNL KAPHTVGINK FGRGWERLHD KLNRPGWLHG SGDGSRFDSS IDPFFFDVVK TIRKHFLPSE HHKAIDLIYD EILNTTICLA NGMVIKKNVG TQRQPSTVVD NTLVLMTAFL YAYIHKTGDR ELALLNERFI FVCNGDDNKF AISPQFDEEF GHDFSPELVE LGLTYEFDDI TSDICENPYM SLTMVKTPFG VGFSLPVERI IAIMQWSKKG GVLHSYLAGI SAIYESFNTP KLFKSIYAYL LWLTEEHEAE ILAAMTQSST ALPIPSMLDV YRLHYGDDEI WLQAADPLTD AQKEAAHTAA ADRARLDLAD ADRRRKVEAD RVEAARVKKA ADAALKPVNL TATRMPTEDD GKLKTPSGAR IPSSAADGNW SVPATKQVNA GLTLKIPLNK LKSVPKSVME HNNSVALESE LKAWTDAVRT SLGITTDEAW IDALIPFIGW CCNNGTSDKH AENQVMQIDS GKGAVTEMSL SPFIVHARMN GGLRRIMRNY SDETVLLITN NKLVAHWSMK HGASANAKYA FDFFVPRSWM NPQDIEVSKQ ARLAALGTGT YNTMLTSDTT NLRKTTNHRV LDSDGHPELT
ProductP3N-PIPO
Descriptiontransframe mature peptide
Modifications684..684:ribosomal_frameshift
MEQTLAQAVS RRNKTDTPMA EERKHFSPMN FSANFVAPEL FYSANVRKIK NIFKERSTTR FLDAISSDFE LVAFLTLSPA HLMQLETVLR QEMRSCAVPI VTSDASFETV AVIKTALDGM RFHFGYTTLE KGWISMMRHA ESCLQESSSS AVNDLQTPIK RVGSLLLSGK NSRRRLRTIC LEPHRATFQD RIWAKWYILW RTCCYATRLK TLYLWYRTKR VFVGENQKAL TVHNPRVDHA YAHRLFLVLS SRYPYLT

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