Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200996"

Accession numberr200996 [export]
Locus nameP3N-PIPO
Descriptionviral protein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley mild mosaic virus [details]

Sequence

GenBank IDsNC_003483
Sequencess-rna of 7262 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event type-1 Frameshifting (position: 566)
AAAAAUAAAA CUCCACUCCA ACCCAAUACA AACAACGAAC AACAAACAAC GAAUUUGCAA CUUACCACAG CAAUAUCGAC CGCUAGUAAC AGUUUAACCA AACUCAGCAA CAAAUCAUCC UUCGACCAAA CGAACUCUCA CCAUCGAGAU GGAGGAGUUC AUUCCUGAAG UGUUCUACCA GAACCAGGUU CAGAGUCUUA AGAAAAUUCU UAAAUCCUGG AAACGCGACA CUUCUAUUUA CGCGUAUCUU GCUCGCGAGC AAGAGGUCCU AGCCUUCCUU GUACUGAGUC CCGCACACAU UGCCAAAUUG AACAAACUAC UCACUGAGGA GUCUGCACGA UGUGCCCUGC UUGCCCAGAA CUGUGAAACC AUCGAAGCUC UGGCCGUUGU UCGGCAAGCC CUGCAGGGUG UCACGCUACA CUUUGGUGAU AAUGGCAUGG AGAAAGGCUG GUUGCAUAUG AUGAAAGCAC UUGAUGCAUG UCUUGACGAA AGCUUCAGCG AGAACGCCGC CGCACUCAAG AAAAGCAUUC AGGCGGUUGG UCACAAGCUC AUCGCAGCAA AAAACCGCAU CGAAGGCUGC GAGCGAUCUG UAAAUCACCU UACAACGUUU CAAUUUGCUC GCGAAUAUGG CUUAAGUACU ACAUACUUCG AAAAAUUAUC CAAUUUCGGU GGGCAUAUUC GAAGUUUUGU GUGGUCCAGC GACUCAGGAG AAAUUUUCCC AAAACUAAAA AGAUCAUCAC GUACGAGGCG CAUCUCGACA UUCACGAGCU ACUACUGGGG UGAGUUCUGG UGCAACUGCA UCUGGUUCCU CUGCUGCUGU UGGUCUCCCG CGCGCUGGUG UUUUAAUUCU GCAGUUUUCA UAUGGAGUCU AUGUGGCGUU UUAAACUUAU CUAUGAUUGU UCUACAGUUU GCUCUUAAGC GUCAUUUUGG UAGAUACUAU UUUCGAUACA UAAUGUCUGG UGUCCUAGCU AUUUGCGCCG UGUGUUGUGU UCAUCUUAAA AACAGAAAAG GGCCUAUAUU GCAAGCCUCC CAAAAAGACA AGCGUCUCAU CGGAAUUUUA GCUUUCUGCA UUACUGUUAU AUACAUGUUU GAUGUUGAUC UAGCCGACUC ACUUAGCAAU AAUCUUCACA AGAUCUCUCG CCUUGUGAAU CUUUUCCUUG ACGAUAACCG CGGAUUCGCA ACACCCGCUC UCGACAAUCU AACGGACUUC ACAACAAUUC UUCAAAGUGG AACAUCAAGU GACGACCUAA AGAUUGUCCA GGAUACGUUG GCUGUGGUUU UACAAGUCGA CGAAGAGGAC GCAACUCAGG AUGACGCAAU AUAUGAUUCC GAUGGACUUC AAACUUUCAA GCAAUGGGUC UCUCAUAACC AACUAGCCGG AAUGCAUCUU GCACGCCCGU UACAAUACCC GUGCUCGAAC ACCUAUGGCC UGACCGCAGA UAACGUCGCA GAACUAGCAA CUAGCAUGGC ACAGGAGGCA AAGCAGUGGU CACAAGUUGU UGGACACACU GGUUCCGGGA AGUCCACACG ACUACCAACU GCAUACGCCA ACUGUUUGAA AGGCUUAGCC GGGCGAAAGA AAAACGUUCU CGUUUGCGAA CCCACUAGAG CUGCAACCGU CAAUGUAACC AGCGGCAUUU CACAGAAUUU UGGUAGGCUU GUUUACGGAC GGCAUGAAGG CUGGAGUAAC CUUGGCGACA AAACAAUACA AGUCAUGACA UAUGGUUCUG CACUCGCAGC GUGGAAAGUC GACAACAAAU UCCUAAGCCA GUUUGACGCA GUGUUUCUCG ACGAAUCUCA CCUCAUCACC ACGCACGCCC UUGUCUUUGA GAGCAUCUGC CAGGAGGUUA CAAACGUCCG CAAGUUCUAU GUGUCAGCCA CACCCCGCGA UGGCAAGAAG UGUCCAGAAG CCGUGCGUAG GUAUGAAAUC AAGACUGUGA AAACCGAGUG CAGCAGCGUC GACACUUUCG UUCGAAGCCA GGAGAAGGAA AACACGCUUU ACGUUCUCAA UCACGACACC GUGCUCGUUU UUCUCGCUGG GAAGGCUGAG UGUGAUAGAG CAGCAAGCAA CUGGAACAAG CUGUACUCAA CCAACAUGUA CGCGUACUCC CUAACAGGUG ACAAUUUCAC AAUCGCAUAU GAGAAAAUUG UCACACGCAU GCUAACUGAG CGCACCAUCG UAUUCUGCAC AAAUAUCCUG GAAACCGGUG UCACCCUCAA CGUGGACUGC GUUGUUGACU UUGGAUUCAC CAUGCGUCCU GAACUUGAUC UUGUUGACAA AUCGCUAACC UUGAUGCGAC GCCGAGUUAC CGAGAACGAG CGUGCACAAC GCAUCGGGCG UGCAGGAAGG CUUAGAACAG GGUACGCAAU CUGCAUCGGC AAUCCCGAAA CGCGCCACGA UCUGGUGCCA CCAGAAACCC UCUACGAGGC AGCCCUUCUU AGCUUCGUUC ACGGCGUGCA AUUCUACAUC AAUGAGCACU UCGAGAACGC CUGGAUUGAG GGCGUCACAA AGUCUCAAGC CUCUGUGAUG ACGCAGUUUA AGCUUUCCCC CUUCCUCAUG CGUGACAUUG UUCGUGAUGA CGGUGCAAUA CCACUAUCAC UCCACAAGAU ACUCAAGGAC UACACGCACC GCAACACUGA UCUGAUAGGA ACAAAACUCU CCGUCAUGUC GCAUAUCUAC AACUCGUGGC CUCUCUACCG GACAGUGCAC CAAUCCAUUU UUCGUGGAGA UUCUAAUGUU CCGCAAACGC UCAGAUACGC ACGCGUUCCU UUCAACGUCA GCACUGCCCA UGAUUUUCCA UGGGAAGAUU UCGCACAGGC AUGCCUUGAG UUCCAGCCAC GUGUUCUUCA GGUCUUCAGU GACAACAGCA GCACUUCGCG CAUAAUCAAC CUACAGAUUG GCAAGAUGCA CAUCGUCAAU UCCAUGGAAG AAGUCAAGAU AAACAUACAC AGCUACCAGC GCUCUGCAGA AAACCUACGC UCAGUCAAAG ACAGCUUUGA GAGCUCGAUC UUUCGAACAA AACUGCUUCG UGGGAACCCA ACUGGAAAGA UAACCAAGCG CAUUGAGACU CUCCUUGAUA ACGUGCGGGU GCUACAACAG GUGCACGCAA AACUAGAGAU GAUUGCAUAC UCAGGUGGAG AGAAAGUUAA CAUGGACAAG AAAUCAGUUG ACGAACUCAA UGAGAUCGUC GAACUCCAGA GCAAGAAUUC ACUCACUGCC GAAGAACUAG CACGCAUAUU GCACCUUACG AAGCCCACCU CCACUUUCUU CAAUCUUUUU GCUGAACGCG GCCGACAAAU GCUCGUCACU CUCCUGGUCA UGGUUGCCGC CUCGCUCAUG UAUCUUGUUU UCUGGGUUUC CCCAAGGAAA CAAGACGACA UCACCAUUGA AGGAAAAGGU AGAGCAUACA AUCGUGACAA GCGCAUGGGG UACGACUCCU ACGAAGAGGA CGAGGUUCGC AACAAGAUCA ACAAGAAGUU CAAAGAACGC AGCACAAGGU UCUCCAACGA UUCCAAACCG GAAACAAACU CAAAAUACCG GAAUCUGAAG CAAGAGUUUG UUAAUUUCUA UGAUCUUAAG ACUGAUGCGA ACGUACUACA AGCUGUGUUC ACUGCAAUGG ACGGAGCCGU UCUUCUUCAA ACCGAAUCGC CAAUGGCAGA UAUUGGCCGU GUCAAUAGAC UGCUGCAAGA CCACUUUGGA GAUAGUGAGA GCCGAGCCGU GCAUGAAGGU CUCAACACCA UGGUUAAGUG CCACUUAACU AUGAAAGAUG GAAGACAGUU UGAGCUCGAC AUGGAACAGC AUGAUCCCGA GUAUGUUGCC AAACUUGGAG GUGAAGUUGG UUUCAGAAUG AACAGAGAUG AUCUACGCCA AGUUGGUGCC ACACGGUACA UCAACCCAAG AGCACAAACA UCCGCAGCGA CUCUCGAAGG CAUGACCAUG AAACCCAUGA GUUCUUUCAC CAUUGAUAGC GCAAAGAUGG UUGGCUUCAU CAAGACUGCA AAAGACACAC UCAACUGCAU CCUCUAUGGC GACUGGAUCA UAGCUCCUGC GCACAUACAA CAGGGCGAAG GGGACAUAAC AUUCAUCUUU CAGCACAUAC AGUUCACGAC CACAACUGAG CGCUUAGCCA GCUACGGCAU CCGACAAUUU AAAGGCCUUG ACCUUGUUGU CAUCCGACGC CCCCAACAGA UACGCGCGGU UAAGAAGGAC AUGCGCGCUA GCAUUCUUGA CACACCUACU GAGAUACAGA UGCUAUAUUU GUCAGUAAAA GGUGGCAAGU ACCAAGUGUC CACGUCCGCU GUGUGCUUUC CACACUACAA CAACCGAUGG GGACAUGUUA UUUCAACGGC UGAAGGUAUG UGCGGCUGCA UUGUAUUUGA CCCCACCACU AAUCACAUUG UUGGAAUCCA CGUCUCCUAC AACGACACGC GCAGAAGAAA CGAGUUUCAG GCUUUCACGA GCGACGUUCU GACAACGAUU AAUGCGCCUG GACACGAAAU ACCUUUCAGC CCGUGGGUCU UUGACUGGAA GUUUUGCGGG UACACGACAA AACCACGGAA CAUGCAAAGC GCACCGAGCA CGCUUGAGAG ACUCAACAUC AACGCCACAG GUUUUGGUUU CAAGCUCAAC GCACAGGAGA UCAAACCUGC CAUGCUCCGC UCCACAGAGU CGUUCUCCAG GGAGUUUCCA AACACACAGU UCAAACUUAU CGGCGAAGUG AAGAAAGGAC UCAUCGACAA ACACACGAUU ACAGGAGAGA AUCCCUACUU CCUUGAAUUC CUGGACACAU UCAAACCAUA UCAAUGGGUA CAGGCCUUCA UGGACGAGUA CGCACCCUCC AUCCUUGCCU AUGAUGCGUA UUUCAAGGAC UUGAAGAAAU ACGAUAGGCC ACCACAUGCA AAUGCUUUCU GCCAGAACAC AUUAACCAAA GCUAAAAACA AGAUGAUCAA CAUUCUCGAA GAGGCAGGCA UGGGAAGGAC CCUAGUACGA ACCACCGAGC AAGUCUUGCU UGACAUGGCG UGGACCACCU CUGGUGGACC AUUAUACCAU GGUAAGAAGA UUGACAUUGU GCAACACUUG UCUGAUGACG AGCUUGUGCA AUUCAGUGAA GCCUGCCAAC AGGCUCUCAU CACUGGAACG CUGGAUGGAG UCUGGAACGG AUCACUCAAA GCCGAACUGC GCUCUUCGCA GAAAAUCCUU GAACGGAAAA CUCGUGUUUU CACUGCUGCC CCCAUCACAA GCCUAAUCGC AAUGAAAUAU UACGUGGAUG AUUUCAACAA GCAGUUCUAC AAAACCCACC UCAAAGCACC ACACACAGUC GGCAUCAACA AGUUUAACCG CGGAUGGCAG AAUCUCUAUG AGAAGCUCAA CAAACCUGGG UGGACGCAUG GGAGCGGGGA CGGCUCCAGG UUCGAUAGCU CUAUUGACGG AUUCCUUUUU GACGUCAUCA AAGACAUCCG GAAGCACUUC AUGGACGCAG AACACCACAA GGAGCUAGAC ACAAUUUAUG AAGAGAUUGU CAACACAAAA AUAUGUCUAG CAAAUGGUCU CAUCAUCCAA AAGAACUGUG GGAACAACAG CGGGCAGCCA AGUACUGUUG UAGACAACAC ACUUGCACUC AUGACUGCUU UCCUCUACGC AUACGUCCGG CUCACUGGAG ACCACGCCUU CGAACUCAUG GACGAAAACU UUGUUUUCGU UUGCAAUGGU GACGACAACA AGUUCGCUAU GUCACCUAGC UUCAUGACAA AGUUUGGAUG CGACUUCUCA CCAUUCCUUU CUGAGCUAGG GCUAACCUAC GAAUUCGACG AAGCCACUGA AGACAUUUGU GAAAACCCCU ACAUGUCCUU GACGAUGGUC CGCACCUCGU UUGGGAUCGG UUUCUCCCUC UCCAUAGAGC GCAUCGUUGC AAUCUUGCAA UGGAGCCGCG CUGGCGGAGU CCUGCAUGCC UACCUCUCUG GCAUUGCCGC UCUUUUCGAA UCCUUCAACA CACCCAAGCU CUUUAAUCUC GUGCACACAU ACCUCCUCUG GCUCAUCACA GAGCACGAGG AGGAACUCUU CUCUAUGAUG GAACUCAGAG ACAUGUUCAU GCCCCUGCCC ACUAAGGAAC AGAUAGCCUU GUUGCACUAC GUCGGGACUG AGCCCAUCGU GGAGGAGACU UUCCUGCAAG CAGGGCAUGA GGAACCAGAU CCCAUAGUUC CACCAGCCUC CGACACCGAU CUGACAAACA UGGCUGCAGC ACCACCGGAC AACAGAAGGU CACGUGCCGU CAUCCCCCGU GGCACUAGUG AUUGGAGCAU GCCCGAACCC ACAAUGCGAA CACUGGGUUU UAAGUCCAAG AUCAAAAUCG AAACACUUGC UGAUGUCCCC GAAGGGUAUA UGAAUACCUU UGCGUCCGUU GCAACUGAGU CGCAACGUAG GAAGUGGGAA GAGGCCACGC GUGGCGAUUU UGGCAUUACC GACGACGAGA AAUGGGAAAA AUUGCUCAUU GCUGCCUGUA UAUACUUUGC AGACAAUGGC ACCUCACCAA AUUUUGAUGA GGAACUCACU AUGGAAGUUA AUGGCGGUCU CAACUCCAUC AAAGAGUAUC CCGUUCGCCC UUUCGUCGUC AGGGCCAAGA AGAUCUCCAC ACUGCGCAGG AUCUUCCGCU GUUACUCCAU CGAAACGAAA CUGAUGUUUG UAAAGCUGAG GCGCGUGCCG CAUUGGGCCA UAAAGCACGG AUGCCUUGAU GAAAUCGUCU UUGAUUUCAU GAUCCCCGAC CAGUUCACCU CCAGGACUGC ACUGGAAACA CUGAAGCAGA CCAAGCUUGC CGCCAUUGGU GUUGGCACAA GCAAUUCUCU UCUCACCUCU GAGCAGACGA ACAUGAGGAC CACUGAAACC CGGAGGCGCA AUGACUACGA UGGUCACGAG GCGCUUCUCC GGUAGAUCUC UCAUGCAGUU UCAYUUCCUU UCAAGCAGUG CAUUUAAAUA CGCUUUUAAU UACAUCAAGC GUCAAGAAUU CCUCCCGCUU GCAGCGAAUC CUUAAAGGGU GGCACUUUGU GUUAUGCAAU GGAAAAUUCA GUGACGCAAU CAACCAUCAU UGGUUGGUGA CAACGCAGUA CUUUCUUUCU UUCACAUCAA GCGACCAGCA CAUCGCCCGC UUACAGCUAA UCCUACCUGA GGGUGGCACU CUGUGUUAUG UAAUGGAAUG UGCUAUCUCG CAACCAACCG UCAUUGGUUG AUGGUGCGGC UAACACCCGC GCUCUUGUAU ACCGGAAAGG UU

Products

Productpolyprotein
Descriptionpolyprotein
MEEFIPEVFY QNQVQSLKKI LKSWKRDTSI YAYLAREQEV LAFLVLSPAH IAKLNKLLTE ESARCALLAQ NCETIEALAV VRQALQGVTL HFGDNGMEKG WLHMMKALDA CLDESFSENA AALKKSIQAV GHKLIAAKNR IEGCERSVNH LTTFQFAREY GLSTTYFEKL SNFGGHIRSF VWSSDSGEIF PKLKRSSRTR RISTFTSYYW GEFWCNCIWF LCCCWSPARW CFNSAVFIWS LCGVLNLSMI VLQFALKRHF GRYYFRYIMS GVLAICAVCC VHLKNRKGPI LQASQKDKRL IGILAFCITV IYMFDVDLAD SLSNNLHKIS RLVNLFLDDN RGFATPALDN LTDFTTILQS GTSSDDLKIV QDTLAVVLQV DEEDATQDDA IYDSDGLQTF KQWVSHNQLA GMHLARPLQY PCSNTYGLTA DNVAELATSM AQEAKQWSQV VGHTGSGKST RLPTAYANCL KGLAGRKKNV LVCEPTRAAT VNVTSGISQN FGRLVYGRHE GWSNLGDKTI QVMTYGSALA AWKVDNKFLS QFDAVFLDES HLITTHALVF ESICQEVTNV RKFYVSATPR DGKKCPEAVR RYEIKTVKTE CSSVDTFVRS QEKENTLYVL NHDTVLVFLA GKAECDRAAS NWNKLYSTNM YAYSLTGDNF TIAYEKIVTR MLTERTIVFC TNILETGVTL NVDCVVDFGF TMRPELDLVD KSLTLMRRRV TENERAQRIG RAGRLRTGYA ICIGNPETRH DLVPPETLYE AALLSFVHGV QFYINEHFEN AWIEGVTKSQ ASVMTQFKLS PFLMRDIVRD DGAIPLSLHK ILKDYTHRNT DLIGTKLSVM SHIYNSWPLY RTVHQSIFRG DSNVPQTLRY ARVPFNVSTA HDFPWEDFAQ ACLEFQPRVL QVFSDNSSTS RIINLQIGKM HIVNSMEEVK INIHSYQRSA ENLRSVKDSF ESSIFRTKLL RGNPTGKITK RIETLLDNVR VLQQVHAKLE MIAYSGGEKV NMDKKSVDEL NEIVELQSKN SLTAEELARI LHLTKPTSTF FNLFAERGRQ MLVTLLVMVA ASLMYLVFWV SPRKQDDITI EGKGRAYNRD KRMGYDSYEE DEVRNKINKK FKERSTRFSN DSKPETNSKY RNLKQEFVNF YDLKTDANVL QAVFTAMDGA VLLQTESPMA DIGRVNRLLQ DHFGDSESRA VHEGLNTMVK CHLTMKDGRQ FELDMEQHDP EYVAKLGGEV GFRMNRDDLR QVGATRYINP RAQTSAATLE GMTMKPMSSF TIDSAKMVGF IKTAKDTLNC ILYGDWIIAP AHIQQGEGDI TFIFQHIQFT TTTERLASYG IRQFKGLDLV VIRRPQQIRA VKKDMRASIL DTPTEIQMLY LSVKGGKYQV STSAVCFPHY NNRWGHVIST AEGMCGCIVF DPTTNHIVGI HVSYNDTRRR NEFQAFTSDV LTTINAPGHE IPFSPWVFDW KFCGYTTKPR NMQSAPSTLE RLNINATGFG FKLNAQEIKP AMLRSTESFS REFPNTQFKL IGEVKKGLID KHTITGENPY FLEFLDTFKP YQWVQAFMDE YAPSILAYDA YFKDLKKYDR PPHANAFCQN TLTKAKNKMI NILEEAGMGR TLVRTTEQVL LDMAWTTSGG PLYHGKKIDI VQHLSDDELV QFSEACQQAL ITGTLDGVWN GSLKAELRSS QKILERKTRV FTAAPITSLI AMKYYVDDFN KQFYKTHLKA PHTVGINKFN RGWQNLYEKL NKPGWTHGSG DGSRFDSSID GFLFDVIKDI RKHFMDAEHH KELDTIYEEI VNTKICLANG LIIQKNCGNN SGQPSTVVDN TLALMTAFLY AYVRLTGDHA FELMDENFVF VCNGDDNKFA MSPSFMTKFG CDFSPFLSEL GLTYEFDEAT EDICENPYMS LTMVRTSFGI GFSLSIERIV AILQWSRAGG VLHAYLSGIA ALFESFNTPK LFNLVHTYLL WLITEHEEEL FSMMELRDMF MPLPTKEQIA LLHYVGTEPI VEETFLQAGH EEPDPIVPPA SDTDLTNMAA APPDNRRSRA VIPRGTSDWS MPEPTMRTLG FKSKIKIETL ADVPEGYMNT FASVATESQR RKWEEATRGD FGITDDEKWE KLLIAACIYF ADNGTSPNFD EELTMEVNGG LNSIKEYPVR PFVVRAKKIS TLRRIFRCYS IETKLMFVKL RRVPHWAIKH GCLDEIVFDF MIPDQFTSRT ALETLKQTKL AAIGVGTSNS LLTSEQTNMR TTETRRRNDY DGHEALLR
ProductP3N-PIPO
Descriptiontransframe mature peptide
Modifications565..565:ribosomal_frameshift
MEEFIPEVFY QNQVQSLKKI LKSWKRDTSI YAYLAREQEV LAFLVLSPAH IAKLNKLLTE ESARCALLAQ NCETIEALAV VRQALQGVTL HFGDNGMEKG WLHMMKALDA CLDESFSENA AALKKSIQAV GHKLIAAKNP HRRLRAICKS PYNVSICSRI WLKYYILRKI IQFRWAYSKF CVVQRLRRNF PKTKKIITYE AHLDIHELLL G

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