Recode v. 2.0 / Database of translational recoding events.
Details for "r201056"
| Accession number | r201056 [export] |
| Locus name | TF |
| Description | viral protein |
| Recode status | Validated |
Organism
| Genomic class | Viral Genome (Virus) |
| Organism | Middelburg virus [details] |
Sequence
| GenBank IDs | EF536323 |
| Sequence | ss-rna of 11674 nucleotides [sequence] |
| Organisation | Pseudoknot (1) [see structure]
|
Recoding event
| Event type | -1 Frameshifting (position: 9,755) |
AUUGGUGGUU ACGUACACGU GCCACCACCC CCCACCAUCC AAGCGAUCCA AAAUGGCGCG CCCUGUUGUG
AAGAUAGACG UUGAGGCCGA AAGCCCAUUU GUCAAGUCUC UACAGAAGGC GUUUCCACAA UUUGAGAUCG
AAGCAGAGCA GGUCACACCG AAUGACCAUG CUAACGCGAG GGCGUUUUCG CACCUUGCCA GUAAACUAAU
UGAAGGAGAG GUGGAAGUGG GCACAACCAU CCUGGACAUA GGCAGCGCGC CGGCCAGGAG GAUGAUGUCC
AAACAUGCAU ACCACUGCGU CUGCCCACUG AGGAGUGCAG AAGACCCAGA ACGAUUAGCG GGAUACGCGA
AGAAGCUUAU GAGUGCAGCC GGAAACGUUA CUGAUCUCAA CAUCUCGGGA AAGAUCACGG ACUUAAAGAA
CGUGAUAGCU AUACCCGACC UUGAGACACC UACAUUCUGC CUGCACACAG ACCAGACCUG CCGCUAUAAU
GCCGAUGUGG CCAUCUAUCA GGACGUCUAC GCUGUCCACG CGCCCACAUC GCUUUACCAU CAAGCGUUAA
AAGGGGUCAG GGUCGUGUAC UGGAUCGGCU UCGAUACUAC GCCGUUUAUG UUUGACGCAA UGGCGGGAGC
GUACCCAAGC UAUUCUACGA ACUGGGCAGA CGAACUGGUG CUGCAGGCCA GAAACAUCGG CCUGUGCAGC
UCCAGAUUGA GUGAGGGGAG AAGCAGAGGG CUAUCCAUUA UGAGAAAGAA AGCCCUCAGA CCAAGCGACC
GAGUUAUGUU CUCGGUAGGU UCGACGUUGU AUACGGAGAG CCGCUCGCUA CUGAAAAGCU GGCACCUGCC
GUCGACUUUU CAUCUAAAGG GUAAGGACUC UUACACAUGU AGAUGCGACA CCAUAGUCAG UUGCGAGGGA
UACGUCGUAA AGAAGAUCAC GAUGAGCCCA GGCCUAUUCG GGAAGCCAGU ACCGUACGCC GUCACCCACC
AUGCCGACGG CUUCCUCGUU UGCAAGACCA CGGACACGGU CAAAGGGGAG AGGGUUUCCU UCCCCGUAUG
UACGUAUGUC CCAGCGACGA UUUGCGACCA GAUGACUGGG AUCUUAGCCA CGGAUGUGAC GCCUGAUGAU
GCUCAGAAGU UACUGGUGGG CCUGAACCAG CGGAUCGUGG UCAAUGGGCG CACGCAGAGA AAUGUAAAUA
CCAUGAAAAA UUACCUGCUA CCUGUGGUCG CCCAGGCCUU CAGCAAGUGG GCGAAAGAGU AUAAAGCCGA
CUUGGAAGAC GAGAAACCGC UGGGGGUCAG AGAACGCAAC UUGACUAUGU GUUGCUUGUG GGCCUUCCGA
ACCAGGAAGA UCCACACCCU GUACAAGAAG CCGGACACGC AGACUAUAGU GAAAGUCCCU UCUGAAUACA
CUUCCUUACU CAUCCCGAGU CUAUGGACGA GCGGGAUCUC CAUGACUCUG AGGAGACGGC UGAAAGUGCU
GUUGACUGCC CGACUGAAUC AGAAAUUGAC GUGCCCUUUG GACGCGGUGA CAGCAAAGAU UGCAGAGGAC
GAUGAUCGUG AGGCGCGUGA AGCUGAGUUA ACUAGAGAGG CGCUACCUCC UUUGACUGCU ACCGAGCCAA
CCGGCGACGA UAUACAGGUC GACAUCGAGG AGCUUGACGC UAGGGCGGGU GCGGGAGUAG UGAACACACC
CCGCAACGCC GUCCGAGUCA CCGCUCAGAG UGGUGACACG UUGGUUGGCA GCUAUCUGGU GCUCAGCCCG
CAGACUGUAU UGCGCAGUGA CAAACUACGC UUGAUCCACG AACUGGCAGA CCAAGUGAAG AUUAUCACGC
AUUCGGGUAG GGCCGGUAGA UAUCCUGUUG AAGGCUAUGA CGGACGUGUG CUGGUACCAA CUGGCAGCGC
UCUGAGUUUC GCCGAUUUCC AGGCGCUUAG UGAGAGUGCC ACAAUGGUAU ACAACGAGCG AGAGUUCAUG
AACAGGAAAC UCUACCACAU UGCCACGCAC GGCCCCGCCC UGAACACAGA CGAGGAGAAC UACGAGAAGG
UGAGAGCGGA AAGGAGUGAC GCCGAGUACG UGUUCGACGU GGACGCACGG AAGUGCGUCA AACGCGAGCA
GGCGUCGGGA AUAGUGUUAG UGGGAGACGC GAUCAAUCCG CCUUAUCAUG AGUUCGCCUU UGAAGGCCUA
AAAACACGCC CUUCGGUGCC CUAUAAAGUA CCGACCAUCG GUGUGUUUGG AGUUCCGGGA UCAGGCAAAU
CGGCCAUCAU UAAGUCUGUG GUCACUAGAC GUGACCUAGU CACUAGCGGC AAGAAAGAGA ACUGCAAUGA
GAUCAUGACC GACGUCAAGA AGCAGAGAGG AUUGGAUAUC GUAGCCAAGA CGGUGGACUC UAUCCUGUUA
AACGGUUGCA AACACAGCCC UGAGGUGUUG UUCGUUGACG AGGCGUUUGC CUGCCAUGCA GGCACUCUGC
UCGCGCUCAU CGCGAUCGUG AGACCCACCA AGAAAGUUGU GUUAUGCGGC GAUCCGAAGC AAUGCGGCUU
CUUUAACAUG AUGCAAUUAA AAGUCAAUUA CAAUCAUAAC AUAUGCACUG AAGUGCAUCA CAAAAGCAUC
UCCCGCCGAU GCACAAUACC GGUUACAUCC AUUGUCUCUA CACUGCACUA CGGAGGCAGG AUGCGCACUA
CGAACCCGCG CAACGACCCU AUCGAAAUUG ACAUCACCAG UAGCACCAAA CCCAAGCCCG GAGACAUCGU
GUUAACAUGU UUUCGUGGCU GGGUUAAACA GCUGCAGUUG GACUACCGUG GACACGAAGU CAUGACUGCG
GCAGCGUCGC AAGGCUUGAC CAGGAAAGGA GUAUAUGCAG UGAGGAUGAA AGUCAAUGAG AACCCACUAU
AUGCUCCAGC UUCCGAACAC GUCAAUGUCU UGUUGACACG CACGGAGGGA AGGCUGGUGU GGAAAACGCU
GGCCGGAGAC CCGUGGAUCA AGGUGCUAAC UAACGUACCC AAAGGAAACU UCACAGCCAC CAUUGACGAG
UGGCAGGAGG AGCACGACAA CAUCAUGAAC GCCAUAAGAG GGGAAGUGGC GCCGACUGAC CCUUUCCAAA
ACAAAGCAAA UGUUUGUUGG GCAAAAGCUC UGAAACCCGU CCUUGCUACC GCUGGCAUCC GACUCAGUGC
AGCGGAGUGG AGCGACUUGA UAGUCGCCUU CAAGGAAGAU AAAGCAUACU CGCCCGAGGU UGCGCUGAAU
GAGAUCUGCA CCAGAAUGUA CGGGUUUGAC CUAGAUAGCG GCCUGUUUUC GGCUCCGCUG GUAUCCAUGA
GAUAUGAGAA CCAUCACUGG GACAACUCAC CGGGAGGAAA GAUGUAUGGA UUCAACACAC AGGCAGCCAG
CAGGCUAGAG CGCAGAUACC CCUUCCUGCA AGGAAAAUGG AGACUGAACC AGCAGAUCCU UUUAUCGGAG
AGGAGAACGC AACCAGUGAG CUCAUCCGCU AACAUAGUUC CCAUCAAUCG UAGGCUGCCG CAUACUCUGG
UGCUGGAACA CGUCAAGCUA CCCGGAGACC GCGUAGAGCG GAUCGUGAUG CAGAUUCGCG CGCAUCACGU
GCUGCUAGUG GGUGAGUAUA ACCUCCACCU GCCUUUACGG CGUGUUACCU GGAUCGCCCC UCCCUAUAUA
CGGGGCGCAG ACCGCAUCUA CGACCUGAGC UUAGGGUUGU CAACUGACCU GGGCAGGUAU GAUCUGGCGU
UCAUAAAUGU ACAUACAGAA UUCCGCAACC ACCACUACCA GCAGUGUGAG GACCAUGCAA UGAAGUUGCA
GAUGCUAGGA GGUGAUGCCC UACGCCACCU GAAACCGGGC GGAUGCCUGC UGAUGCGUGC CUAUGGGUAC
GCAGACAGGA CCAGCGAGAU GGUGGUGAAU GCGCUAGCGC GUAAAUUCGC AUCAAUACGC GUACUGCGAC
CAGCGUGUGU GGCCUCUAAC ACUGAAGUCU UACUGCUGCU GUCGGGCUUU GACAACGGGA AACGCCAACU
GACAAUGCAC ACAUCCAAUC UGAGACUCUC CAGCGUUUAC UCGGGAAACG CACUACACAC GGCAGGGUGU
GCACCAUCAU AUAGAGUCGU AAGAGGCAAU AUCACCGACU CCGACGCCGA UGUGCUAGUA AAUCAGCUGG
GCGUGAACAA CAAGGUCUGC GACGGAGUUU GUAGGGCCAU GGUCAAGAAG UGGCCUUCCU GCCUACCAAC
GACAACUGGA AAAGUAGGCG ACGCCGUGCU GACCACUGAG CCCCGAAAAA UCGUGCACGC UUACUGUCCU
AAUUUCGGAA CCAGUAGAGA GGAGGUUGCC GAUGCCGACC UAGCAGCUGU GUAUAGAGCC GUGGCGUCCU
UGGCUGAUGA GACAGUCCGC ACAAUGGCCA UACCACUCCU GUCAACGGGG ACGUUCGCUG GGGGAAAGGA
CCGCGUGCUG CAGUCGUUGA ACCACCUAUU UACGGCCCUG GACACCACGG ACGUCGAUGU AACGAUAUAC
UGCCGGGAUA AGUCGUGGGA AAAGAAAAUC CAAGAGGCCA UUGAUAUGAG GACGGCAACC GAACUGCUAG
AUGACGACAC AACGGUUAUG AAAGAGCUAA CCAGGGUGCA UCCUGAUAGC UGCCUAGUGG GGCGCAGUGG
AUUCAGCACG GUGGACGGAC GGCUGCAUUC GUACCUUGAA GGAACUAGGU UCCACCAGAC UGCUGUCGAC
GUGGCAGAAA UAGCCACUCU GUGGCCAAGG AGAGAAGAAG CGAACGAGCA GAUAACACAC UACGUCCUUG
GCGAAUCCAU GGAGGCCAUA AGAACCAAAU GCCCGGUGGA UGACACCGAU UCGUCGGCAC CACCAUGCAC
CGUCCCGUGC CUUUGCCGCU ACGCCAUGAC CCCCGAGCGC GUACAUAGAU UGCGCGCCGC GCAGGUGAAG
CAGUUCACGG UCUGCUCCUC GUUCCCGCUG CCAAAGUACA AGAUACCAGG CGUGCAGAGA GUGGCGUGUU
CGGCUGUAAU GUUGUUUAAU CACGACGUUC CAGCGCUGGU AAGCCCUCGC AAGUACAGGG AACCGAGCAU
UAGCAGCGAG UCGUCAUCCU CUGGACUGUC UGUGUUCGAC CUGGACAUAG GCUCUGAUUC AGAGUACGAA
CCAAUGGAAC CCGUGCAACC CGAACCGCUG AUCGACUUGG CAGUCGUAGA GGAGACGGCC CCCGUCAGAC
UAGAACGGGU GGCCCCUGUG GCUGCACCUC GCAGAGCCCG CGCGACACCC UUUACUUUGG AGCAGCGGGU
UGUAGCACCA GUUCCUGCGC CGCGUACGAU GCCAGUCAGA CCCCCUCGCC GGAAGAAAGC GGCGACCAGA
ACACCUGAAA GGAUUUCGUU CGGCGAUUUA GAUGCCGAGU GCAUGGCCAU CAUAUAUGAC GACCUGACUU
UCGGGGACUU CGGCGCGGGC GAGUUCGAAC GUUUAACGUC AGCAUGACUA GACCGGGCGG GGGCCUACAU
AUUCUCAUCG GAUACAGGCC CAGGACACCU ACAGCAAAGA UCGGUCAGAC AAACCAGACU AGCGGACUGC
GUGGCGGAGG ACGUACAUGA AGAGAGAGUA UUCGCCCCGA AGUGUGACAA GGAGAAGGAA AGACUGCUGC
UUUUACAAAU GCAGAUGGCA CCCACAGAAG CCAACAAAAG CCGCUACCAA UCCAGGAAAG UGGAGAACAU
GAAGGCAGAG GUUAUCGACA GACUGUUGGG CGGAGCGAAA CUGUUCGUGA CACCCACAAC CGACUGCCGA
UACGUGACAC ACAAGCACCC AAAGCCGAUG UACUCGACUA GCGUGGCAUC CUACCUAAGU UCGGCCAAGA
CUGCAGUGGC GGCAUGCAAU GAAUUCUUAA GUAGGAACUA CCCAACUGUG GCAUCCUAUC AGAUCACGGA
UGAGUACGAU GCCUACCUGG ACAUGGUGGA CGGUUCUGAG AGCUGUUUAG ACAGAGCAGC CUUUUGUCCA
UCUAAAUUAC GCAGCUUUCC GAAGAAGCAC AGCUACCAUC GAGCCGAAAU AAGAAGUGCC GUUCCGUCUC
CCUUCCAAAA UACACUGCAG AACGUGUUGG CCGCUGCCAC GAAACGUAAC UGCAACGUGA CGCAGAUGCG
GGAGCUGCCG ACCUUGGAUU CAGCGGUGUU UAAUGUCGAG UGCUUUAAGA AGUACGCAUG CAACAACGAC
UACUGGGACG AAUUCGCUCA AAAGCCCAUC AGGUUGACGA CGGAAAACAU CACGUCCUAC GUGACCAGAC
UGAAGGGCCC GAAGGCAGCC GCUCUAUUUG CAAAAACCUA UGACUUGAAG CCGUUGCAAG AGGUACCGAU
GGACCGCUUC GUCGUGGAUA UGAAGAGAGA CGUGAAGGUG ACACCCGGCA CCAAGCAUAC AGAAGAACGG
CCAAAGGUGC AAGUCAUACA GGCAGCCGAA CCCCUAGCCA CCGCCUACCU GUGCGGUAUA CAUAGAGAAC
UGGUUAGAAG GUUAAAUGCA GUUCUGCUGC CGAACGUCCA CACCCUGUUU GACAUGUCGG CGGAAGACUU
UGAUGCCAUA AUAUCCGAGC ACUUCCGCCC UGGGGACGCU GUACUAGAAA CAGACAUCGC AUCGUUCGAC
AAGAGCCAAG ACGACUCGCU GGCGUACACG GGGCUGAUGU UGCUAGAGGA CCUCGGCGUC GACCAGCCUU
UGCUCGAGUU GAUCGAAGCG UCGUUCGGGG AAAUAACAAG CACGCAUUUA CCAACGGGAA CUAGGUUCAA
GUUCGGGGCC AUGAUGAAAU CUGGCAUGUU CCUGACGCUC UUCGUGAACA CAAUGCUCAA CAUGACUAUA
GCUAGCAGAG UGUUAGAAGA ACGGCUGACC AAUUCUAAAU GUGCCGCCUU UAUCGGCGAU GAUAACAUUG
UGCAUGGAGU GAAAUCUGAU AAACUGCUGG CUGAGAGAUG CGCCGCAUGG AUGAACAUGG AAGUGAAGAU
CAUCGAUGCA GUCAUGUGUG AGCGCCCCCC CUACUUCUGC GGAGGGUUUA UCGUGUUUGA CCAAGUUACA
GGCACCUGUU GCAGAGUGGC AGACCCGCUG AAGAGACUCU UUAAGCUCGG AAAACCGCUG CCUGCUGAAG
ACAAACAGGA CGAGGACCGC AGAAGGGCGU UGGCCGACGA GGCACAACGG UGGAACCGCG UAGGUAUCCA
AGCAGAUUUG GAGGCCGCAA UGAACAGCCG UUACGAGGUC GAGGGGAUCC GAAACGUCAU CACGGCGUUA
ACCACGCUGU CACGGAAUUA UCACAAUUUC CGACAUCUAA GAGGACCCGU UAUUGACCUC UACGGCGGUC
CUAAAUAGUU GCGUGAAUAC AUAUUCUAAC AACAGAUAUU AUUGACGCAG CACCAUGAAU UACAUACCUA
CGCAGACGUU CUACGGCCGC CGAUGGCGUC CUCGCCCGGC GGCCCGCCCC UGGGUGGCUC CACCACCCGU
AUACUAUCCA CCACCGCCAC CCGUGCCUGU CGACCCGCAA GCGCAGCAAA UGCAACAACU UAUUGCUGCG
GUCAAUACGC UGGCUAUAAG GCAGAAUGGC ACCCGAACAC CUGGACAACA ACGAAGGAAA CGUCAAUCAA
ACAAACCAAA GAGGAAACAG ACACCCCCGA AGAAACAGAA CCCGGCGAAA ACAAAGAACA AGCAGAAACC
GCAACCACCC AAGCCUAAGA AACGGAAACC CGGCAAGAGA GAAAGGAAAU GCAUGAAGAU AGAGAAUGAU
UGCAUAUUCG AGGUCAAGCU CGAAGGCAAG GUCACUGGGU ACGCCUGCCU GGUAGGAGAU AAAGUGAUGA
AACCAGCACA CGUGAAAGGA GUCAUAGAUA ACCCUGACCU UGCCAAGCUA GCUUUUAAGA AAUCGAGCAA
GUAUGACCUU GAGUGUGCGC AAAUUCCGGU CCACAUGAAG UCAGAUGCCU CGCAGUUCAC CCACGAGAAA
CCAGAAGGAC ACUACAACUG GCACCAUGGU GCAGUACAAU ACCUGAACGG AAGAUUUACC AUCCCGACAG
GUGCUGGGAA GCCAGGGGAC AGCGGUAGGC CUAUCUUUGA CAACAAGGGU CGCGUAGUGG CCAUUGUGCU
GGGGGGAGCC AACGAGGGAG CGAGGACGGC UCUAUCGGUU GUCACCUGGA ACAAAGACAU GGUUACGCGC
AUCACCCCAG AAGGAACUGA GGAGUGGACU GCCCUGGUGA CAACUGCUUG CAUCCUGAGC AAUCUGACUU
UCGAUUGCAG CCUGCCACCA UGUGCGCCUU GCUGCUAUGA AAAAGACGCA GAGGGCACCC UGAGGAUGCU
GGAGGACAAC GUCGAUAACC CCGGAUACUA CGAUCUCCUG GCUGCAUCAA CGCAUUGUGA CGCCCCGCAG
CGGCGUCGCC GCAGGGGGCU AACUGAGGAC UACGAGGCUU AUAAACUCAC UAAGCCGUAC AUAGCCUAUU
GCUCUGACUG CGGGAACGGA CAGUUUUGCU ACAGCCCGAU AGCUAUUGAG AGAGUCAGGG CCGAGGCAUC
GGACGGAAUG CUCAAGAUAC AGAUCUCUGC GCAAAUAGGC CUGCAGGUGG ACGGAGCUCA UGCGUGGACG
AAAAUCAGAU ACAUGAAAGG GCACGACGUG GAGGACACAG ACAGGAACUC ACUGGAGGUG UUCACCACCG
GAGAGUGUAC GGUCCAUGGC ACCAUGGGGC AUUUCAUCGU AGCUACAUGC CCCGAAGGUG ACUCCUUGAC
AGUGGCGUUC GUUGACAAAC AUAAGGUCAG GCACGCUUGC AGGAUAGCAU ACAAGCAUCG UGUCCCCGUA
UUGGGCAGAG AGCACUUUAC GGUACGGCCA CAUCAUGGAG UAGAAUUGCC AUGCACCACG UACGCCAUGA
GAACAUCAGU CACUACCGAA GAAAUAGAAA UGCACGUGGC GCAUGACGUG CCCGACAACA CCUUUCUAUC
CAAGACCGGA AAUAAAGUGA AGAUAACGCC AAAAGGAAAG UCUAUUCGCU ACAACUGCAC GUGUGGGUCU
AAGGAGAGCG GUGUCACAAA GCAAGACAAA GAAUUUGACA ACUGCGAAGU UUCGCAGUGC CACACCAUGG
UGACCGCCCA CGAUAAGUGG CAGUUUAACU CUCCUUAUGU CCCUAGGGCA GGCUCAGGCA AGAAAGGAAA
GAUCCACGUA CCCUUUCCAC UGAGCAACUC UACGUGCAGA GUUCCGUUGG CGCCUUUACC GAACACCAUC
CCGGCAAAGA AUGGAAUCAC ACUGCAGUUG CAUCCGGUCG CCCCGACGCU ACUUACCUAC CGCACCCUCG
GAGAGAAACC AGAACACCAC ACAGAAUGGA UAUCAGAAAG UUGCGAACGU ACACUCCCCG UACCUGAGGA
GGGGUUGGAG UACACAUGGG GCAAUCACGC CCCUGUGAGA CUGUGGGCAC AACUGACGAC UAAGGGUUCA
GCCCAUGGGA UGCCGCACGA AAUCUUCUCA UAUUACUAUG GAUUGUACCC UGCCACGACG GUUGCAGUGU
GCGUGGGGCU AGCGUGUGUG AUCUUGCUGG CUCUGUCCGC GUCCUGCUGC CUGUGCGUGU CAGCGAGAAA
UAAGUGCUUG ACCCCGUACG CGUUGACGCC AGGAGCCGUG GUGCCGUGCA CUUUGAGCUU AUUGUGCUGC
GCCCCCAGAG CCAAGGCCGC AACGUUUGCG GAGACAGCGG CAUAUCUAUG GGACGAGAAC CAGACGGUGU
UCUGGAUGCA AUUCGCAAUC CCCGUAGCAU GCUUUAUGAU AGUGACAUAU UGCCUGCGCC ACUUGAUGCU
GUGCUGUAGG ACCGCUUCUU UUUUAGUGGC AGUAAGCCUG GGAAUGGGGG CGACCCAGGC GUAUGAGCAU
AGUGUAACGC UCCCCAACGC GGUCGGAUUU CCGUACAGAG CCCAUGUAGA CAGACCAGGG UUCUCUCCAU
UAACGCUCCA UAUGGAGGUA GUCUCCACUA GCCUAGAGCC GACGCUCGCC CUGGAUUACG UCACUUGCGA
GUACAAAACG GUGGUGCCGU CGCCUAAGGU CACCUGUUGC GGCAUGUCGG AGUGUGCACA CCAGCAAAAA
GCGGACUUUC AAUGUAAAGU CUACACCGGC GUCUACCCCU UUUUGUGGGG CGGUGCCUAC UGCUUUUGCA
AUUCGGAAAA CACUCAGCUG AGCGAAGCUU AUGUUGAGCG GAGCGAGGUG UGCAAACACG AUCACGCAGC
GGCGUAUCGC GCUCAUACAG CCGCAUUGAA GGCUAAAAUC AGAGUGACCU ACGGUUCCAC GAACGGGACG
GCUGAGGCGU UUGUCAACGG AGAGAGCACC GCACGAAUUG GAGACCUGAA AAUGAUCCUA GGUCCCAUAU
CCACCGCGUG GAGCCCCUUU GACCCAAAGA UCGUCGUCUA CAAGGACGAA GUCUACAAUC AGGAUUAUCC
ACCGUACGGA UCCGGGCAAC CGGGUAGAUU UGGGGACUUA CAGAGCAGGA CCACCGAGAG UAACGAUGUG
UACGCCAAUA CUGCACUGAA GCUGGCUCGC CCAUCUGCCG GCACGGUGCA CGUUCCAUAU ACCCAGACGC
CGUCCGGGUU UAAGUAUUGG CUAAAAGAAA AAGGGGACGC AUUGAACCAC AAGGCUCCUU UCGGCUGCAU
CAUCAAGACG AACCCCGUAA GGGCAGAAAA UUGUGCAGUC GGAAACAUAC CAGUGUCUCU AGACAUUCCC
GACGCGGCUU UUACACGCAU AGUCGACGCA CCAUCGCUAA CCGGCCUGAA GUGCGAGGUG GCGACUUGCA
CGCACUCAUC GGACUUUGGA GGCACUUUGG UGGUGGAGUA CAAGACCGAC AAAGUGGGGA CGUGCGCCGU
CCACUCAGAA UCCAACACGG CUGUUAUGCA GGAGACGAGU CUGUCCGUGA CGAUGGACGG CCGAGGUACG
UUGCAUUUCU CCACCGCCUC AGCCUCACCG UCCUUCGUAC UGAAAGUGUG CAGUAGCAAA ACCACUUGCA
CAGCAAAGUG CGUGCCGCCG AAGGACCACG UCGUCCCUUU UCCUGCCAAC CACAACAAUG UUGUGUUCCC
GGACUUUUCC AGUACUGCAG UGUCUUGGCU CACCCACACU AUGGGCGGAG CUACUGUGGU GAUUGCUAUU
GGGAUCACCA UAUUCUUAAU AGUUACUUGC AUAGCUUUUA GUAGGCACUA GAUAUAGUAG AACGGAAAAU
GGAAAACUAG AAAAAUAGUA GGGUAGGCAA AGGCAUCAUU AAUCAUCAUA CUAAGCAGUA UACACUUAUA
UAACCUCAAA UACAACCUAU AAUUACACUA ACUGAGUAGA AAAACAAGAA AACCCAUAAA AAGUAGAGUA
AGCAAUGACA UUAACCCUAU AAUUACUAAC ACGUAUACUA ACAGACUAGA AAAAGAGAAA AUUACAGAAA
AAGUAGAGUA GGCAAUGGCA UUAUUACAUA UUAACAUGUA UAGCACUACA GUAGUAAGCA AUGACAUUAA
CCCUAUAAUU ACUAACACGU AUACUAACAG ACUAGAAAAA GAGAAAAUUA CAGAAAAGUA GAGUAGGCAA
UGGCAUUAUU ACAUAUUAAC AUAUAUAACA CUACAAUAUA ACUUACAACA CCAUAUAGAA GGGCCUUGCC
ACAGGCCGCC AUAAUUAUAA ACAGAACUAA UUGGCAGAAU UAAUUGGAUA CUAAUAAUUG GAUUAUUUAU
GAUUUGGAAA UAAUAUCGCG ACGAUUGGCU AGUCGCAAUU GGUUUUAAUA UUCC
Products
| Product | polyprotein |
| Description | polyprotein |
MNYIPTQTFY GRRWRPRPAA RPWVAPPPVY YPPPPPVPVD PQAQQMQQLI AAVNTLAIRQ NGTRTPGQQR
RKRQSNKPKR KQTPPKKQNP AKTKNKQKPQ PPKPKKRKPG KRERKCMKIE NDCIFEVKLE GKVTGYACLV
GDKVMKPAHV KGVIDNPDLA KLAFKKSSKY DLECAQIPVH MKSDASQFTH EKPEGHYNWH HGAVQYLNGR
FTIPTGAGKP GDSGRPIFDN KGRVVAIVLG GANEGARTAL SVVTWNKDMV TRITPEGTEE WTALVTTACI
LSNLTFDCSL PPCAPCCYEK DAEGTLRMLE DNVDNPGYYD LLAASTHCDA PQRRRRRGLT EDYEAYKLTK
PYIAYCSDCG NGQFCYSPIA IERVRAEASD GMLKIQISAQ IGLQVDGAHA WTKIRYMKGH DVEDTDRNSL
EVFTTGECTV HGTMGHFIVA TCPEGDSLTV AFVDKHKVRH ACRIAYKHRV PVLGREHFTV RPHHGVELPC
TTYAMRTSVT TEEIEMHVAH DVPDNTFLSK TGNKVKITPK GKSIRYNCTC GSKESGVTKQ DKEFDNCEVS
QCHTMVTAHD KWQFNSPYVP RAGSGKKGKI HVPFPLSNST CRVPLAPLPN TIPAKNGITL QLHPVAPTLL
TYRTLGEKPE HHTEWISESC ERTLPVPEEG LEYTWGNHAP VRLWAQLTTK GSAHGMPHEI FSYYYGLYPA
TTVAVCVGLA CVILLALSAS CCLCVSARNK CLTPYALTPG AVVPCTLSLL CCAPRAKAAT FAETAAYLWD
ENQTVFWMQF AIPVACFMIV TYCLRHLMLC CRTASFLVAV SLGMGATQAY EHSVTLPNAV GFPYRAHVDR
PGFSPLTLHM EVVSTSLEPT LALDYVTCEY KTVVPSPKVT CCGMSECAHQ QKADFQCKVY TGVYPFLWGG
AYCFCNSENT QLSEAYVERS EVCKHDHAAA YRAHTAALKA KIRVTYGSTN GTAEAFVNGE STARIGDLKM
ILGPISTAWS PFDPKIVVYK DEVYNQDYPP YGSGQPGRFG DLQSRTTESN DVYANTALKL ARPSAGTVHV
PYTQTPSGFK YWLKEKGDAL NHKAPFGCII KTNPVRAENC AVGNIPVSLD IPDAAFTRIV DAPSLTGLKC
EVATCTHSSD FGGTLVVEYK TDKVGTCAVH SESNTAVMQE TSLSVTMDGR GTLHFSTASA SPSFVLKVCS
SKTTCTAKCV PPKDHVVPFP ANHNNVVFPD FSSTAVSWLT HTMGGATVVI AIGITIFLIV TCIAFSRH
| Product | TF |
| Description | transframe mature peptide |
| Modifications | 9755..9755:ribosomal_frameshift |
ATFAETAAYL WDENQTVFWM QFAIPVACFM IVTYCLRHLM LCCRTASFLS GSKPGNGGDP GV
Publication
- Firth AE, Chung BY, Fleeton MN, Atkins JF. (2008) Discovery of frameshifting in Alphavirus 6K resolves a 20-year enigma. Virol J. 5:108-108. [abstract]