Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201076"

Accession numberr201076 [export]
Locus namepolyprotein-RdRp
Descriptionpolyprotein-RdRp
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismLettuce infectious yellows virus [details]

Sequence

GenBank IDsNC_003617
Sequencess-rna of 8118 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeUnknown (position: 0)
Description+1 (or other) ribosomal shift into +1 reading frame
GGUAAAGUUA UACAUUUACC GUUGGACAAG GUAAGAUUAC CGACAUCCUA AUAGAAUUGU AUAACUUUUG CUCUUUCAAU CUUCUUGGAG AAUUUCGAUG GCACUCGAAG UUGAAAGCGC UUUUUCUUUA UCUUAUUUGC UAAAAGAAAA CAAACAAACC UCAAAUAAUC UCUUUUCGCU GAUACAAGUA CCCUACACGA AAAUGACCCA UGCGAAAGGA AAGAAGACAC AUCUUCUUAG AUGUAUUUUA GGAUCUCCGU UUGAGACUUU AACCAAGUCU AGCAUCCGUA GGUCCCUGAA AAACCUAAGA GAAGUCUGUA AUUUACCUUA UUGCAAUUUU AAGAAAAUAC CAAAAAAUAU AAGUUAUAAG UAUCAAAACC CUUUCCUUAA AUUAUAUGAA AUAAACAAUA AUUUUAUUAA UUGUAAAGUG GGCGCCACUG GUAACACGAA UUCAACGUAC GAUUGGCGUA AUUUGUCCAC UAUUGGUAAU GGUUGGAGUG UGACGUCAUA UCAUAAUGAU UCUGUCAGUA GGUUACAUGU AAGUAUGGUA AAUAACAUUC CUAAUUCCAA CACGAAGAAG CUCAGUUGGU GGGUUACUCG AGUUAGGAGU AAAAAUCCUU GGAAACGUCC CUACAAGGUU AUUUACCAAA GGGAUUUUCG AGAUGACGGG AUUAAACCCU AUGUCAGUGA AUUUAUUUUA UAUGCCCCUA AAAAUAGAGC UGACUUGGAA AUGCAAUCCA UACUACUGUC UUCAGUAGAA UGUUUCCAGG ACAUUAAGUA UGCCCUCAAU UACUGGACCA AUUUAAAAUU UAAAGAGAUC UGCAAUAGUG CGCUUAAAAG GUUCACUCAA ACCAAUAUCA UUAUCACCCC UGUAAAACCC AGGGUUGUGA GUGUAAACAA AGCGCGAGAG GUUUCGAGUA GUGUAGAAGU GAAGUUGCAG AGAUAUGAGC GAGAGGGUGA AGUAUUCGUU GUGUCCAAGG CAGGUAAAGA AGAUACGCGA GUCUUGAAUG ACGACAACGC CAUUAGGAAU CUGUUCAACG CCACUCUCAA UGGUGGUAAA UACAAGCUUC AUCCAGAAGC AAAAUCUGCA ACUGGAAAAA GAUUCAAGUA UUAUAAAGAC GGAUUUUGUU GGCUCGACGU CUUUGCUGAU GCCAACAGAA GAAUACCAGA GUGGGUAAAA CCACAUUGUC UUCUCACGGG AUCAGUUUUG AUGUCGUGUG GCUUGUGGGA UUUUGCAAAA AGAAAGAUGG UUAGUGUGUC GCACGGAUUG CUUCAUUAUG AUAGGAAGUU AGAAAGAUCU UCAGCUAGAG CGGGGGUGAG GGACUUUGUU GGUGCCUCAA AUGAAGCCGU GCAGAGGGAA GACUUCAGAG AUUUAGAUCU ACGGGUUGAA GAGUUCGCCG AGAGAGUGCU AGAGACGGCC AAUUUGAGAU CUGAUAACAG AUUGAUAGAC AAUAUAUUGA CCAGGGCAUC AGAUUACAUU AAUAAAAAGA GUAAAGAGUC UAAGGAGUUA GAUAUUAACG UUUGUCUGUC CAUGGAUGAG AAGAAGAUGA UCACCAAUUU AUUUCCGGAC AUUCAAAUGA GUUUUAACCA AAAAUCUUAC UCAAACCAUG GUGUCUUCAA UGCAAUGAGG GCUUGCGAAA AUUUUUACUU CUCAAGGAAG UUUAAAAAUU CAGACUAUAU AGACGCAGGU GGUGAUGUGG UAUCCACUUU ACGUUCUAAA AACCACAAUG UCCACAUCUG UUCGCCCAGG UUAGAUUUGA AAGAUGCUGC UAGACACAUC CAAAGGGCCA CAGUUAUUGA CGGGCUGAAA GGAUAUGGUG AAACCAUAUC AUUCUGCACC AACAAAACGG AAGACUGCGC GGUGAACAGA GAUAUAAUCA UUGCAGUUGA GGUUUAUGAC AUGACUUUAA GGGACAUGGC AAAAGCUAUG UUGUCUCAUG GAAGUAGGAA AUUUGAGUUU AGUUGUAUCA UACCACCUGA GAUAUUCACU AAGGAGUGUA AUGUCGAAUU GUAUGAAGGC AGACUCAAAG UGACGAGGAU UGGAGAUAAU GUAGAAUAUU AUUACGGGAG CAACGGAGAG ACGUUCAGUC AUAGUUGUCA GACUCUAAAA GACAUUCUAU CAGUUCAAGU CUUCCAAUUC GGCGGCCGUG UGUUUAAGAA AACCUUGGAG CACUCUAGAG GACAAUUACA CUUCUUCUCC AUAUGCAUUU GCGAAAAAAU UGAACCUGGG AGUGUAAAAU UGAAAACGUA UUACCAGAGA AGUGAAUUAG AUAAAGUCAC CCUGAGAAUA CCAGUUAAAG ACAGCUUUGG GGUGGUAACA CAUUAUAUCA UAAAAGAAGA UAGAGAAUUU GUCAGUUCUA UGAUAGAGUA UGUUGCGAAU ACAGGCAUAA AAAUAGAUGA UAAAAUGGUG GAAUGGACCU AUUCUCAGUA UAGGGCUAAG AAAACUGUGA CUAUAAAAUC CGGAAAGGUA ACUCAAAAAG AGACCAGGAU UAGAAAAGAA CUAAUUCCAG GGUUUAUAGC CAUAAUCAUG UCAGAGGGGA UCAGGGCAAG AGAAAAGACU CAUUAUCUUG CUAAAAUGUU GUACACCAGU CAUUAUAAAC CUUCGAUAGU UAAUAUCAUC UUUAGGUUGA UAAUGCAUUU UUUAGGUGGC ACUAAACGAU UUAUAUACGA GUCGUUGGUA GACUGUUUAA AAUUUUUGAC AAACAGUGAC UACAUCGAUA CAAUAGUCAA CACCGAGAGU CGUAUAGAAG ACUUAGAUAA GUGGUUUGUA UUUGAACAAA ACGUCACGAU AACCACGGAC GCAGAAGAUC AACCUUCUAU AUUAGAACAA AGUGUGAAAA CAUUCUUGAG CAAGUAUAGU GAAGAUGUAU AUGAAAGGGG UGAUCGUAGU GAGUUCGAAU UAGAAGAAUU UUCAAGCGAA CAAGAUCUGG UUGAUCAGUU GUUGAACUCU GGAGGUGGGU CUAAGGAAGA CGAAUGGUUC UAUUCAUAUA UUUUUUCAAU AGUCAGAACC AAGUGCACUC UGAGUUUAGC CUGGAGAUGG ACAAAUAGAA UAUUCAAUUU CAUAACAUCU UGUAGAGCUA AGGGGAAAGA UUUUGUAAAA UAUAUUUAUG AGAUCAUAAA AAUUAUAAUC AACAAACCCU GGGAAGCGUU AUGUCACUAU UUAGUCCAGG GAUAUAAAAC UGUAUUAAAA AUACCCAUGA CUUGUGUCGA UAGUGUAAAU UAUUUGAAGA GGAAGAGUCU AGAGAAAAUA CUGUCGUAUU UUUCUCAUGA GAGAGCUGAU GAUGAGUACA UUUUCCCCGG AUAUGAUAGU GAUUUUAGUG AAGAGUCCGG UGAUUAUGGA GAUGAAAAUA CUGAAUUAGA CAGUCGCAGU CGUUGUACAG UCAUUAAAUC AAAAGUAGAA AUGUUGUUUA GAAAUAUCAA AGGUCACAUC GAAAAAUUCC UUCAAAGAUG UGGGAUAAUA GAUCAAUACA AUAAGAUCUA UCAUUGGUUC AAAUCUAUUU UAACAGACGU AGAUUGUUUU AAUUCAGUAU UAAAUUUUAU AACACACACU GGCUGUGAUG CAUUAUUAGC AGUCCUCACA GGUCAUUUCU CAAUAGCUAG UUGUGCGUUA AAAUUUAUGA CCGAUGUGGU GAUUGAAAAG AAUCUCAGUG AAAAACACCA CACCACAACU AAAUUAAUAG CAGGCAAUUU GACGCAAUGC AUAUACAAAU UGGAUUUCAU UCAUCCAAUU UGGAUCCCUA UUAGAUGGGG CGUCAAAGAA AUAUCAAAAA UUCACAUCAA AAAGAAACUU CUAAAUUGGC GAUCAACCAA AGAAGUCACC AACGAGAGUA UUUGUAAAGA UUUAGUGCAU AAGUCUUACA UCAAAUACUU UGAUAUAAAG AAAGCAGUUU GGUUGUUAUG GUUUAGUCUU CUAAUCAUAU UUUUGCAUCC AACGUUGGGU UUCUUUAUAU UGUUUAGCAU UUAUCCUGCG AUUGAGAUAA AGAGGUACUA CAACAACGUA GUCUGCUUUA ACAACAUUAA AAUGAGUUAU CCACAUGUUA UUGACAGAUU AGGAGGUACC UACAAUUUCG CCAAAUUAAA GAAAGCCGUU AGGGAGAAAU UUUCUGAGAA CAAGUCUCAA GGGGUAAAAA UUUCAGAAAU ACCAGCAGAG AAGGAUGAAG AUGUCAUGCC ACCACUAGAA GAAGUAGAAA CACCUAAGAG AUCAGUAGGA AGACCUUCUU CGAAGCAAGA UGAUAUUGAA GAUGAAUGUA AUAUUAAAGA AGACCCUACU GAGAGUUUAA AUUUUUCAAA CAUUGAAGCC ACAUCAAACA GGUAUGACAC UCUUCGUGUA GGGAACAGCA AAUUGUGCAA AUUCCUAAGA UUUUACCCCA AGUCUAAAUG UUAUGCUAAC AUACAGACUG GAGAUUUGAU UAGGGAUAGC AUAGAGGAAU UUUACCAUUU AGAAAGAAGU AAACUGGAUA UUGAGAUCAG UAAAAUGCAA AGGGUAGUAG AGAUCAUGAA UGAUACUGGU CGUAUGUUGG AUAAUGUCAG ACGUAUGAUC GACGACAGAU CCAUGUACGU UACCUUAGAU GGAGUAAGCU GGUAUAGGUU AGGAUGUAAA GAUAAGAAUC CCGCCAAAGA GGACUUUAAA GCCAUUUUCG ACCACAAUUU CAACAUCAUG GAAGGGAAUG CGAAGGUUAA AGAAUUUGCU GUAUCAUCUG AUGAAUGGAG GGGUAUGUAC AGCAAUGAAA GAUGUAGAGC UAUAGAACAA CUCUUCAAUG AUAAUAAUGA AAUGGUAAGA AGACCCGAUG UGAAUGGUCU AAAAUUUUAU AAUAAACCAC CAGGGGCAGG GAAGACGACU ACAAUAGCCA AAUUAAUGAG CAAAGAUUUA AAAAAUAAGG UCAAAUGUCU GGCUCUAUCC UACACCAAAG UUGGGCGUUU AGAGUUGAUA GAUAAAUUGA AGAAAGAUGG AAUCGAAAAG CCUGAGAAGU ACGUUAAGAC AUACGACAGU UUCUUGAUGA ACAACGACAA UAUCUUAGAA AUUGUCAAUU UAUACUGCGA UGAGGUCUUC AUGAUGCAUG CGGGUCACUU CUUAACUCUA UUAACCAAGA UAGCAUACCA AAAUGGGUAU UGUUAUGGAG AUGUCAAUCA AAUUCCCUUC AUUAAUAGGG ACCCAUACAC ACCUGCUUAC UUAUCAAGAG AAUUCUUUAG GAAACAAGAU CUAAACUAUG ACACUUAUAC GUACAGGUGC CCAUUAGAUA CCUGUUACUU GUUGUCGAAU UUAAAAGAUG AGAUGGGUAA CAUCAUUUAC GCUGGUGGAG UCAAAAAUGU GAAUGAGGUU UAUCCAACCA UCAGGUCACU AAAUUUGUUC GGUAUCAAUG UUGUGGGUGA AGUCCCAGUC GAAUAUAAUG CCAAAUAUUU AACUUUUACA CAAGAUGAGA AGUUGAACCU ACAGAGGCAU AUAGAUUCGC AAGGAGGUUG CAGAAACGCG GUCAGCACUG UAAAUGAAGC GCAGGGAUGC ACUUUCAGUG AAGUAAACCU GGUCAGGUUG GUUCAAUUUG AUAACCCUGU UAUGAGCGAC AUAAAUCAAU UUGUCGUAGC AAUUUCCAGG CAUACAACAA CAUUCAAAUA CUUCACACCU CACUCUCGAU UAAAUGAUAG AGUGUCCAAC GCCAUAUCAU CACUACAAUC UGUUAGUGAU UUUGUUUUGA AAGACUAUCA UUUUAGACAG UGCCUUUGAC GUGUAUACGC UGAACUUAAC GCACAGGGAC UUUAAGUUAC CACUGUGUCG ACCACCAGCU GCGAGAUAUG AGAGCAUAAU AGACCUGAUG GACAUAAUAU CACCAGGGGU GGCCUUUUAC AAUUAUUUAC ACAGGACGUU GAUUUUUGAA UACUCAGAUU ACUACUUACC UCCAUGUGAA GAUUUGAGAA UAACUUUGAG CAAGUCCAAA CCAUACCACC CUGGAGCUUA UGUUGUCUCG AAAAUUCUCG GGAAGGGAGA AAGAAACAGA CCGAACACUU GGAAACAAGU UAUUCAGUCA CUAUCUCACA GGAAUUUUAA UGCGCCAAUU AUCAAUCACA AGUUAGAUGU UAAAAGAAGC GCACAAAUAC UAUAUGACUC GGUGGUGAAA UCGUUAAGAC AAGACAGGUU GACUGAGUGG UAUGAACCUA UUUUACCUGA CCUUUUCAAA AUCGGUAAGU GGUUGGAUGA UAGAGAUGGU AGCAAAUAUC GUAUGUUGAA CCGUAGACUA GACUUUGCCA GUUUAGCAGA CAAGUUCAAA ACUCUCAACC UCAUGGUUAA GGGUGAGACC AAGCCCAAGA UGGAUCUUAG CACAUACGAC AGUUACAAUG CUCCAGCUAA UAUAGUCUAU UACCAGCAGA UAGUCAAUUU GUAUUUUUCA CCCAUCUUUU UAGAGUGUUU CGCAAGGUUG ACUUACUGUU UAAGUGAUAA AAUCGUUCUA UACAGCGGCA UGAACACAGA CGUUCUAGCU GAGUUAAUUG AAAGCAAACU ACCAUUAGGU CUUAACGCAU AUCACACGCU UGAGAUAGAU UUCAGCAAAU UUGAUAAGUC UCAAGGCACA UGCUUCAAAU UAUAUGAAGA AAUGAUGUAU AAGAUGUUUG GAUUUUCUCC UGAGUUGUAC GAUCGAGACU UCAAAUACAC GGAGUACUUC UGUAGAGCGA AAGCAACUUG UGGAGUGGAU CUCGAGUUAG GAACACAGCG CAGAACUGGA UCUCCAAACA CUUGGUUGUC UAACACUCUA GUUACUUUAG GUAUGAUGUU AUCAUCUUAC GACAUUGAUG AUAUAGACCU ACUCCUUGUU AGCGGGGAUG ACAGUUUAAU UUUUUCCAGG AAACAUCUAC CGAAUAAAAC CCAAGAGAUA AACAAAAACU UUGGGAUGGA GGCCAAGUAU AUAGAGAAAU CAUCUCCAUA CUUCUGCUCC AAAUUCAUAG UUGAGUUAAA UGGUAAGUUG AAAGUCAUAC CUGAUCCAAU ACGAUUCUUU GAAAAAUUGU CAAUUCCAAU UAGACAAGAA GAUUUCGUAA ACGGAAGCGU AGUCAAAGAA CGGUUCAUAU CAUUCAAAGA UUUGAUGAAA GAAUAUGAUA AUGAUGUCGC CGUUAUACGC AUUGACGAAG CAGUGUGUUA UAGAUACAGC AUACCGGUUG GCUGUUCCUA CGCAGCAUUG UGCUAUAUAC ACUGUUGCAU GUCGAAUUUU GUUUCUUUCC GUAGGAUUUA UGACAAUUGU GAAAUUGUGU GGAUUUAAGA UGGACACUUC AAGUUUUAUC GCCUCGAUUG AAAAAGACAA UUUGAUGGAU UGCUUGAUCA GUUUAGUUGA GAUGAGAGAU CGUCUUAGGU UGUGCAACGA UUUCCCAAUA UUGAAUUAUG GAGUUAACAU UUUAGAAUUA CUAAUAGGCA AAAGGUUGAA UAAAAUUAAU AAUUUAAAGA AUUGUUAUGU AAUUAGAGAA CUAAUAACAA UAAAUAUAAG UAAGGAGUGG GUUGGAAAGC AAGCUCUAAA AGUUGGCUUA CAUUGCUUCU UAAAUCUAUC UCAAGCCGAA AGCAGACAUG UCAAGUAUCU UUUGAGCGAC AAAGAGUCCU UAAAUAAGAU GAACUUCUCU AGAUACUAUG UCCCCAAAGU GGUAACAGAU UUGUAUUUAG AUUUGAUUGG GGUGUUAUAC GUGAAUACAG GAUACAACAU AGAUUUAGUA GAAAAAUUUA UUUUCGAUAA AUUAGAAUUU CUAGUUUAUG AUGGAGAGGA GGGUUUCAAA AGUCCACAGG UUGAAUACAA UGACAUAUGU ACGGUCUACA AUUUGAAACC AAUAAUAAAA UACAAUCGUU GGCACACAGA UGGUUCUAUA GUUAUAGAGU GUGGUGACGU AAUAGGAAAA GGUAUUAAUA AAACAAAGAA AAAAAUUUGC AAUAAAUGAU GCCAAAGCGG AGUUCGUAAA GAACUUCAAA GCAAAAAAUA AAAAUAACGA AUAGGGUGUU UUGAUAGUAG UUCCCCCCUA UGGUCUAUAA GUGUUAGUAU UAAUAAGUCU UAUAAUAAAA CCAAAAAUAU AUUAAUAUUA UAUCUAUGUC AUGUAGUUAA CAUAAAUAUA AUGUCUUCCU AAAAUCCUUG GAAGACUGUA UAUAUAGAAU AAAGGUCG

Products

Productpolyprotein
Descriptionpolyprotein
MALEVESAFS LSYLLKENKQ TSNNLFSLIQ VPYTKMTHAK GKKTHLLRCI LGSPFETLTK SSIRRSLKNL REVCNLPYCN FKKIPKNISY KYQNPFLKLY EINNNFINCK VGATGNTNST YDWRNLSTIG NGWSVTSYHN DSVSRLHVSM VNNIPNSNTK KLSWWVTRVR SKNPWKRPYK VIYQRDFRDD GIKPYVSEFI LYAPKNRADL EMQSILLSSV ECFQDIKYAL NYWTNLKFKE ICNSALKRFT QTNIIITPVK PRVVSVNKAR EVSSSVEVKL QRYEREGEVF VVSKAGKEDT RVLNDDNAIR NLFNATLNGG KYKLHPEAKS ATGKRFKYYK DGFCWLDVFA DANRRIPEWV KPHCLLTGSV LMSCGLWDFA KRKMVSVSHG LLHYDRKLER SSARAGVRDF VGASNEAVQR EDFRDLDLRV EEFAERVLET ANLRSDNRLI DNILTRASDY INKKSKESKE LDINVCLSMD EKKMITNLFP DIQMSFNQKS YSNHGVFNAM RACENFYFSR KFKNSDYIDA GGDVVSTLRS KNHNVHICSP RLDLKDAARH IQRATVIDGL KGYGETISFC TNKTEDCAVN RDIIIAVEVY DMTLRDMAKA MLSHGSRKFE FSCIIPPEIF TKECNVELYE GRLKVTRIGD NVEYYYGSNG ETFSHSCQTL KDILSVQVFQ FGGRVFKKTL EHSRGQLHFF SICICEKIEP GSVKLKTYYQ RSELDKVTLR IPVKDSFGVV THYIIKEDRE FVSSMIEYVA NTGIKIDDKM VEWTYSQYRA KKTVTIKSGK VTQKETRIRK ELIPGFIAII MSEGIRAREK THYLAKMLYT SHYKPSIVNI IFRLIMHFLG GTKRFIYESL VDCLKFLTNS DYIDTIVNTE SRIEDLDKWF VFEQNVTITT DAEDQPSILE QSVKTFLSKY SEDVYERGDR SEFELEEFSS EQDLVDQLLN SGGGSKEDEW FYSYIFSIVR TKCTLSLAWR WTNRIFNFIT SCRAKGKDFV KYIYEIIKII INKPWEALCH YLVQGYKTVL KIPMTCVDSV NYLKRKSLEK ILSYFSHERA DDEYIFPGYD SDFSEESGDY GDENTELDSR SRCTVIKSKV EMLFRNIKGH IEKFLQRCGI IDQYNKIYHW FKSILTDVDC FNSVLNFITH TGCDALLAVL TGHFSIASCA LKFMTDVVIE KNLSEKHHTT TKLIAGNLTQ CIYKLDFIHP IWIPIRWGVK EISKIHIKKK LLNWRSTKEV TNESICKDLV HKSYIKYFDI KKAVWLLWFS LLIIFLHPTL GFFILFSIYP AIEIKRYYNN VVCFNNIKMS YPHVIDRLGG TYNFAKLKKA VREKFSENKS QGVKISEIPA EKDEDVMPPL EEVETPKRSV GRPSSKQDDI EDECNIKEDP TESLNFSNIE ATSNRYDTLR VGNSKLCKFL RFYPKSKCYA NIQTGDLIRD SIEEFYHLER SKLDIEISKM QRVVEIMNDT GRMLDNVRRM IDDRSMYVTL DGVSWYRLGC KDKNPAKEDF KAIFDHNFNI MEGNAKVKEF AVSSDEWRGM YSNERCRAIE QLFNDNNEMV RRPDVNGLKF YNKPPGAGKT TTIAKLMSKD LKNKVKCLAL SYTKVGRLEL IDKLKKDGIE KPEKYVKTYD SFLMNNDNIL EIVNLYCDEV FMMHAGHFLT LLTKIAYQNG YCYGDVNQIP FINRDPYTPA YLSREFFRKQ DLNYDTYTYR CPLDTCYLLS NLKDEMGNII YAGGVKNVNE VYPTIRSLNL FGINVVGEVP VEYNAKYLTF TQDEKLNLQR HIDSQGGCRN AVSTVNEAQG CTFSEVNLVR LVQFDNPVMS DINQFVVAIS RHTTTFKYFT PHSRLNDRVS NAISSLQSVS DFVLKDYHFR QCL
Productpolyprotein-RdRp
Descriptionpolyprotein-RdRp

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