Recode v. 2.0 / Database of translational recoding events.
Details for "r201099"
| Accession number | r201099 [export] |
| Locus name | MTP-RBP |
| Description | major tail shaft protein (MTP)/receptor-binding protein (RBP) |
| Recode status | Reviewed |
Organism
| Genomic class | Viral Genome (Phage) |
| Organism | Lactococcus phage 936 sensu lato [details] |
Sequence
| Variant | Lactococcus phage Q54 |
| GenBank IDs | DQ490056.1 |
| Sequence | DNA of 1318 nucleotides [sequence] |
| Organisation | Sequence (1)
|
Recoding event
| Event type | +1 Frameshifting (position: 637) |
ATGGCAGATT TATTAAAAGC CGCTTATCAT GGTTTTGGGC GTGTAATGAT TTTCCCTATT GTTGCCGGAA
CACACGGTAC GGGCGTTAAA CTCTTGGGAG GGCGTTCCTT GACGAAGACG CCGGAACAAA CAGTAACAAC
TATCGGCGCA GACATGGACG GCGTATATAT GGCGAAAACA GGGGCGCAAG TTACTAGCCT TGAATTCGTT
ACTATCGGAG AAATTCCGGG AGAGTTTAAA ACAACTTCTT TGGGCTTCGG TTATGTTGGC GAACCTACTC
GAAAAGTCTA CACTGACGAC CCTAAAGCGT ATGCGCCTTA TGGTATTGCA TTCGCTCAAT GGAAAGATGA
AGACCCTAGC ACGCAAAAAA TTCGCGTTCA AATCTTCTAT TCATTGGCAG CGACTACGCC ACAAGAAGCC
GCAGAATTTG ACGACCCAAC AGGGGAAGCA AGCATTACAG AATTTACTTT TAGCGCAACA GCTCAAGGTT
TTGCGGGAGC AATTCTAAAC GGGGTATCAC GTTCATTCCT TGAATTTGAA GTAGATGTAA CAAATAGCGC
AGACCCTAAC TTAGCTTTAT ATAATAAAAT TTATACAGAT AAACAAATTG TCTTGCCGTC TGATGTCGTG
ATACCCTAAT GACCCTGACG AGGGGTTATT TAAAGCTTGG TCGTGGAGTG CCGACGGGCA AGAAAGATTC
ACGACTATTT ACCCTAATTT AAATTTAGGA GATAACACTA AGGATTTTAA TAACGTTTGG GGATTTCCAA
ATCTAAGCGG TTCTATTCTT GTACCAGAAT CGGCAGTCCA AAAAACACAA GACGGAGGGT TTAGTTATTT
AACCTATAAC CCAACCGAAG GTAGTAAAGA CTGGTTTAGG TTCTTTTTAG TTCCTGATAC AGATACACCT
AATATGACGA AAATCACAGT TAAACCAAAT ACTAATTACA CATTTAGTGT TTGGTTGAAA GGTACTGGAC
AGCATACTAT TTATGCTTTT AACGATTGGA CTGCTACCAA TACGCCTTGG AATTTAGACA TTAATCTAAC
TAGTGATTGG AAACTATATA CATTCACAGT TATATCTAAA GATGTACTTC CAAATAATAA TATTCAATTC
TTTATAAGAA GTAACAACGG AACAGAAATT AACCTTAAAA AACCTAAAGT CGAAGAGGGA ACGGTAGCCA
CTCCTTGGAC GCTATCAGCT AACGAAGCTG ACCCACCGGA CTACCCGGGC TATATCGGTA AGTATGTAGG
ACAAATAGGA AGTGTACAAA GCACAAACTA TTTGGACTAT GATTGGTTTA AAGCTTAG
Products
| Product | MTP-RBP |
| Description | major tail shaft protein/receptor binding protein |
| Modifications | 636..638:ribosomal_frameshift |
MADLLKAAYH GFGRVMIFPI VAGTHGTGVK LLGGRSLTKT PEQTVTTIGA DMDGVYMAKT GAQVTSLEFV
TIGEIPGEFK TTSLGFGYVG EPTRKVYTDD PKAYAPYGIA FAQWKDEDPS TQKIRVQIFY SLAATTPQEA
AEFDDPTGEA SITEFTFSAT AQGFAGAILN GVSRSFLEFE VDVTNSADPN LALYNKIYTD KQIVLPSDVV
IPNDPDEGLF KAWSWSADGQ ERFTTIYPNL NLGDNTKDFN NVWGFPNLSG SILVPESAVQ KTQDGGFSYL
TYNPTEGSKD WFRFFLVPDT DTPNMTKITV KPNTNYTFSV WLKGTGQHTI YAFNDWTATN TPWNLDINLT
SDWKLYTFTV ISKDVLPNNN IQFFIRSNNG TEINLKKPKV EEGTVATPWT LSANEADPPD YPGYIGKYVG
QIGSVQSTNY LDYDWFKA
| Product | MTP |
| Description | major tail shaft protein |
MADLLKAAYH GFGRVMIFPI VAGTHGTGVK LLGGRSLTKT PEQTVTTIGA DMDGVYMAKT GAQVTSLEFV
TIGEIPGEFK TTSLGFGYVG EPTRKVYTDD PKAYAPYGIA FAQWKDEDPS TQKIRVQIFY SLAATTPQEA
AEFDDPTGEA SITEFTFSAT AQGFAGAILN GVSRSFLEFE VDVTNSADPN LALYNKIYTD KQIVLPSDVV
IP
Publication
- Fortier LC, Bransi A, Moineau S. (2006) Genome sequence and global gene expression of Q54, a new phage species linking the 936 and c2 phage species of Lactococcus lactis. J Bacteriol. 188(17):6101-6114. [abstract]