Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201102"

Accession numberr201102 [export]
Locus nameorf1a-orf1b
Recode1 namepol_m_vir_apv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismAcyrthosiphon pisum virus [details]

Sequence

GenBank IDsNC_003780
SequenceRNA of 10035 nucleotides [sequence]
OrganisationComplex structure (1) [see structure]
Sequence (1)
Trans/Interaction (1)

Recoding event

Event type-1 Frameshifting (position: 8,154)
DescriptionPotentional stem-loop downstream of frameshifting site.
CGAAAATAAG TATATATTGC TTCTATTTCG ATATTGTTCA AGCGTTGACC GTTGCAGGCG CTTGTCCTAT TATATGTGCG GGGTTAGGAT TTCTCAGAAT TTATAAGAAA GGTATTTTCT CTCTTGTCTT ATAGAAATTT CCACATTATT TACTTAATTG GTTGATTTGA ACTTTTATCG TTCGTATTTT GTTATTTTGC TTTTAGCAAG AATTGTTTTA TTTCACCCAT AGGTGAGTTT TAAATTTATA ATCGTTATAA AATCACGATG TCTTTGTCAA AACCATCTGA ACTTGAACAG GTTAAACCTA GTTCATTGTG GATAACAACA TACCACACTA TTAAACAACT CATAAAAGAA TGGTTTACTA AACTCGTTGA GGCTGTACTT AATCCCGGAG AAATCCGCAT AGCTATAACA GCTGTAGTAC ATACTCTCAC TGGCGTTGTC CTTTCAACGA TGACCTTGTT TAAGAAAGGG ACGGGTTATT TAATGAAAAT TATTTCTGGT GTGAATCTCC TATCCACATT CGAATTATTA TTAGTTCAAA TAGGGCGTAA CAAGGAATTG TTTACACCAG ATAGTGCTAT GCGTCACGCT GAAAGTAAGC TTAGTGAATA TTTGGATCAT AGTGACTCCG AAGAGGTTTA TGCCAATACT GAACAAGAAG CTGAAAATAT ATGGGTAGGT TGTTTATCCA CTATACTTAC AACCCTGTTT GGTGCATTGT TAGCCGGATT TGGATTGAGC ACTAAAGGAT TAGAAGGACT TACGACGACT TTTAGAGCTG CTACAACGAC TAAAAACGGA GTGTTTTGCA TCAAAGAGCT TGTCGATGCT GCACTCAAAA TTATAGCAGA AGAAAAATTT GATCCAGTTT ATAAAGAACG AAAAGCCATA ACAGCATTAA CTGAAGAAGC ACAAGTTTTG TTAAGACTTA ACTTGGGTGC AATAGCCTCT GACAATAAGG TGAAAGATAG ATACCGAACT ATTATCAAAG ATATTAACCA AGCCTTAACC ACTTATAGAC ACCAAGATAG TGCTAATATG CGTTCTTTAT TGGCTACTAT GGTTGGTGAG CTAAATAAGA AGTTGGCTGA GGTGGAAGCA TTGATCCCGA CTAGACAAGT TACCGCAGGT GTTTATTTAC AAGGTGAAAA AGGTGTGGGC AAATCATCTT TATGCAATTA TTTAGCTAGT TATTTAGCAG AAGTATTTGA TTGGTCCCCA TCTATATACA ACATATCACC AGGTGTAAAA TTTTATGAGC CTTACCTTAA TGAAGACTTT GGAATATTAA ATGAGTTTGG TAGCACAGTC GACCGTGATA CTTTTTCGGT AGACGCGAAT AGAATATGTT CTAGTGACCC ATTTAATTTC GAGAGTGCTG GTTTAGCCGG TAAGGTTTCT ATGTGCCAGT TAAAAGCCTT GTTTGTGACT ACCAATGTTC TTAATCCAGA TATTAAAGAA CTTCAGCCTA ATGCTGTTCC TGCTTTTTGG GACAGATTTA TAATTATTAA GGTTATGGAC CCTCTTATAA CTGATAGGCG AAAACAAGTG AATCATAGGA AATCAGATTT CTCTCATTTG TCTTTTCGGG TATACGATTT AGGCACTGAT GAAAATGATC TTCCTAAGTT TCGTTTACTT TACGATAAAC TACATATTAG CGATATCTTA CAAATTTTGC GTACTAAATT AGCTTTAGAA ACCAAAGCTT TTTATAACCG GCTTAATTAT CCTATGCCTG AGGCATTACA AAAAATTATA GACTTAGAGT CAAATCCCCC TCCAGGCTCA TATGCTTTCA AATATTTTGG TTTCCAAGAA AAGATTGTTG AAAATTCGGG TGGGCGTGAT TTCTGTATTT TGCGTTTACA GGGTCCTGAA GGAACAGGTA AAACAACATT AGCTATGAAA TTAGCAGAAA GATGGATGGA ACTTACAACA GCGTTTGAAG GTAAATCTCG TTATACGATT CAAAAATCTT CCAGTCTAGA AGAGTTTGTG CCTCTAAATA CACCAACCAT TTACGTTTTG GACGATTGGG TTACAAGTAA CATTACAATC CAAGAATCAT CAATTTATGT TACAAAAATT AATGCAACTA CTAATGATAG TATATTCATA ATAACAACGA ATGAGATTAT AAAACGAAGG CTTCCTTGGT GTGAGTTACC TAATAGACTT CTAGTGGGTC TACTCGGTGG CACATACAAT TACCCGTATG ATATGAATCC TTATAAAGAA TTATATTCAG GAATGCGTAG GAGAATAGGA CTAGATGATT TGTATTCAGT TAGAGGAAGG GTTCATGACG TTTCCTCGAC AGAATATTGT ATGGTAGTTA CTACTGATGA AAAGAGTGTT TTGACGTGCA GTGGAAAGAA TGTTGGTTTT CCATTTATAG TAGAAAGCAT AAAACAACGC TTTATAAATA TGATGGAGAA TAGGTACAAT ATAACCACTA TACAAGGAAG ACCCGAAAAT GAATTACCAA CTGTGGATTT TGAAATAAAA GTTGCAAATA AAGATATATT ATTCAAAAAG TTGAGCACCT CATTAGGTGC AGCGAGCTTG TATTTAAAGC CTGATGCTGA AGCTAGTTTG TACGTATCTG AACGTATTAT TAGTGGTATA GCTGAGGTAA ATCCGGATAA AGCTATAAGA CCCTCTGATT TTATATGTAA AGAGGTTTTT GATGATAGTA TACCAACTGA TGAACGCTAC ACCACTATTG TAGAGCGGAT AACGCGAGTT TTATTACAAT ATTTCAAGGA TCCAACATTT AGAGTAGTGA TTCAAGATGA AAAACGAGTT GTTTACTCTG AAAATGGTGT TGTTTATTAT TATGAAGATA AAGAGGATAC ACGTATAGCA TTTGAGGGAT ACAATTTAAT AATTAATTTA TCAACACCAA AAATGGTTTT TCCATATGAT TTCGCAGCTG CGTTAGTTGA GGATAGGATG GAGAAAAAGT TTGTTGGCAC ACTATCCAAT CTTACTGCTG CTGAGTACAC CATAATAGAG AAATATTATA AACGATCCAT TACGAGTAAG AAGTGTAATC CTTTTCTTGT AGCCGTAGCT ACTAGAGAAC TACAATTAAC ACGTATGAAA GACCCTAAAT ACGTGAAAGG CTTATTAAAA CTCCAGAACA ACTACCTGTT GAAGCTTGGT TTATGTGGAT TAGCTGGAGT GGGTTCTGTT GCCCTATTGT ACGGAGTTTA TAAATTGATC GCTTCTACAA TGAAACAAGA GGAAGAAAAG ATCAAGGACA ATGCATTTGC AAATGTTGGT TCAACTCCAC CCAAGCGCGC TATGAATAAT CAATCGAATA AGGATAAACA GCGATTGGGT GCAACATTAA CTGATCCCAT AATAGAGAAC TCACCGCATC ACAAACACAG AGGACGTATT ATACCTAATA AGAAACGGAC TTCACGATAC GCCACAACAA GCACGAGCTC TTCTAGCGAA ACCACTACAA CAAGCGCAAG TTCTTCTGAT GAAATAACAA GTGATAGTGA TAGCAGCATT AGTAGCGACT CAAGCGTAAA ACCAGAACCT ATAACAATTG TGGGTAATCC TGCTCATAGA ATTATAGGGA ATTCTGCTCA TACAAAGAAT CGCGGCACTA TTATACCAAA CAATCATACT AGGGAGATAA AGCGCGTTGA TAGGGCAAAG AAGGAAAACG AGGATTATAA TAAAGTTCCC CATGAACATG TTTGTACAAC TTGTGGTTGC CTATTTACAC ATATACACAA GTTTAATAAA AATTTTCTAC ACCCTACTTA TCAAAACGCA TGCCCTAATT ATAAGTGTGC CAGTTATCAC GGTGGTAATA ATAAATATAA CGCTAAATTG ATCCAAGCAG ACTTTATAAA TAGTGCTGAT GAACCACTTA CACCAAATGC GATGACTAAA TTAATGGGAG AAGAATATGC CCCAGTTAAA GTTTCCTTAC TTGAGTTTTT CTCTGCTCTA CCAAGCGAAG AAAGAAAGCA GGTTTATGAT TATATAAACC AAGCACGGGA TGCTAATGAC AGAACTTTTG CAAGACTTTG CAGGAAGTAT CCTGGTTTGG AGAATTGTAT AATGAAAGCA GTGCATGCTA ACATGTTAAC AGACGCTGAT ATGATAACTA ATGATGATAC AGATCTAGAG ATCTTACACA AAAAGCTAAA TAAAGCTTAT GTGCAAGTTA ATTATGCAGG TTTTAGAGCG TATGCTTTAC ATGTTGGCGA AGGTAAATTT CTCACTGTTG CGCATTGTTT CGATAGTGTT GGCAGATCGC TAGTTTTACT TAGTGAAGGG AAAAGTTATC CAGGTGTCGT TGTTTCTATA ACTAGAGAAC GAGATCTCTC TGTAGTATAT TGTAAAGAAT TGTCCAATTT AAGATCAGCT AAGAGCGCAT TTGTCAAAGA CTCATCTGAT TTGGTTTTAG GTGGTTACTT CATGCGCTGC GGACCTTGTG TTACTATAGT CTCAGGAAAT ATAGAGTACA GGGAATATCA AGAATTTATT GACGGCTCGT GTAGTAACGA GTATTATAGA CCCAGTATGG AAGTTCTGAA ATTGAGGAGA GTGGGGTTGG TTGTTACTGA AACCATAAGG AAAGGCGATT GTGGTTTTCC ATTTGTGGCA AGGATAAATG GAACTATGCG TATAATTGGT ATACATAATG CCTACAAGAC GCACACAGTT GTTTTTGGTG CATTTATATC CCAGCCGCTG ATAGAGGAAT TATGTTCAGT AGTCGTGCCA AATGCAGATG TACCTTCAAC CGCCGTGGTA GTTAAAGTCC CTGTAATTAG GGATGATAAC TACAACGATT ACTTGGAAAT GTCTATGCCC ATGGAGTATG CGGAAGAATT CAAAAAGTGT TTTTCCCCAG ATCCCTATAT GCCTAAGAAT TCGGGCCTAA CATCCATAGG ATTTAATCAA AAGTTTAGAA ATTACAACCA TATGAAGGAA AAACACTTCA CTCATGAATT GACGCTTGAG AACGCTAACA CCTGTTTACC TGCTGCCTTT TCAGACAGGT ATGTTACTGA CACATCAGAA TTAGTTAAGA ATGGTTTTGG GAAACCAGAC CCATTGTGGA CACAAGCATG TAAGTATGGT AGAAGAAATA AGAATTATGA TAGGCACATT TTTCGTCATG CTGTCGAGAT GGCTTTAGAC TATAACAAGA TGACTTATTG TGCGGAAAAA CCATTTAAGT TTTTGACTGA ATTTGAGGCT TTAAACGGTA GAACTGAACC ATTCTTGTCT AATGTAGATA TCACCACAAG CGCAGGACCA TATGCTAAAT ATTTTCATAA TATATATACC AAACGTGACA TTTTAGATAC TGAGTTAGCG GACGGTAAGC CCATTTATAA ATTTGCGCAG AATCGCGCAG GTCAATCTAT ACGAAATCAT CTTAAGTCAC AGAGGAATTT GCTAGCTGTT TATGGCATAC CTCCGTGCTT AATATCACAA GACAATGCCA AAGTAGAAAA TATTGAAAAA GAGAAAGCAC AAAAAGGAAA AGTTCGTTTA TTCAATAATG TTGATCCAGC AGTGAACGCT ATTTTAAAGA TTATGTTTGG GGATTGGTTT TCTAGGGCTA TGGCAAAGTC TAGCGAAGGT TATTATGCTA TAGGGCAAAA CCCTTACACA ACATCTACGG AGATATGGCA TAGATTTAGT ACCAAACAAG GAAAAATTTT AAACACCGAT TTCAAAGCCT TTGATAAACT GTTGATAACT GAACTTATCG AAGCTTTTTG TTATATAGGG GGCGAATTAA CAAAGAACGA AAAACATCCA CAATCAGCGC TCATGTATGA AGCTATATCC CTTACTCTTA TACACGCTGT TCATATTTTA AACGGGAGTG TATATGTTGT CAATAATGGA AACGAAAGTG GTACTTTCGT TACAACACTC TTGAATTGTG TGAGTGTACA TATTATTTTT AATTACTCTT TCATAGTTTG TTGGAACAAA GTGCCTAGTT ATGTACATAT AAAACCATTA TTGAAGGACA TTATGAGTAG AAGTGAGTTA GCAATTCTTG GTGATGATAA AACACAAGTA GTGAGTAAAG ATATACCGAT GGAAGAAGAA GACCTGATTG ATATAGCAGC CTCTTTGGGA ATGGAATGCA CGAAGGCTAA AGGTGGTTTA GATGACGGAA AGCAAATAAA CTTCTGCTCC AGAGTACTAG TATGGGACGA GGTTGAACAG ATAGTGTATC CAAGGTTAAA GAAGTCTAGT ATTATTGGCT TACTTTATTG GTTTGCTAGT TTAGATAAAA ACCAAGTTAG AGATAATTTA ATGATAGCAC TATTTGAAGC CTCTCTTCAT GAACGTGAAT TTTATGATTC TGTTCTAAGG GACGCTATGC TCGTAAGTCT GGAATTTGGA GTAGACATTA GAACTGTAGC TTTTACTAAT TACAGTCAGT CAAGACAGCG TCTAAAATCG ATGCTTATGA ACGATTTTGA ATACCAACAA ATTTCGGCGT TGGCGGACCG TAAAACGAAA GAAAGTGATT ATAGCGATTT AATTCGGATA CTAAAAACCG CTCAATTACT TGAAAACGAC ATACAAAAAG CAAAAACTGC TGACATAAAT AATTTCTCTG TTGTTAAAAA TAGGGCTCTT GCTATACAAA AATATACAAC AACATCTACC ACTCCCACTA CAGGAAGCGT GGTTTATGAG AGTGAAATGG CACCGCTTAG TACTAATAGT AATCCTATTA GTGCTTGTCT TGAGCTTATT AGTAAACTTA AGACCGCAGG CCCCGTTGAG CACTTTGAAC GAGCAGGACC CCCCCATAGC CCAACTTATT CCTGTACAGT CACATACGCG GGAAGACACT TTGGTGGTGA AGGTCCATCC AAAGCTAGTG CTAAAACACA GGCTTACGGA GCCCTCAGAC AATATTTAGA AGACCATATT GTTTGTAATG CCGCGTGTGA AGATCAGCGC ATTGAAGCGA CACAAAAGAT ACGCAAAGTC GCGATTACGG CATTCTCATT TTACATCGAA AACCATATTA ATACAGCAAT CAACAATGCG GATGGTAAGA AATATATTAT CATTATCGGT AAGCGATCTG CTGACGATAC TGTGGAACAA ATTGACGGAT TTTATAAATT CCACCGTGGT GGGAATTGTT ATATTCTGTC TCCGATCATT GAGAAACTCG GACGGAAAAC GGCGGCGGAA TGTTACCGCT ACTACCCAGG TGTGAGTTTT GACTCAAGCA CAAATGAAGT TACGTTAGAT GTACACGCAA GTACATCCAA TTATTCCTTA AGGGATGATT TTGAAAAGGA TTACACAGAT GACGATCATC TTGTTTTCGC AAATAGTGCT GAAGATAAAC CAATACTTGG AGTTATGGAA AATGACGACC CCCAGACCAT GCCTGTTACA TCAGTTATGG ATTCCGACAA AGCATTATAC CAACCCATTA TTATGAACAG ATCCGCACCA AACAACTCCT GGCTTCGAGC TGGTGGAATT ACTTTTAACA TACACGATCT GGTTTATAAT CAGTTTGTTG GTTGTAACAA ACAAATAACT GTTGGGGACG GTACAGCCGC CGGTACTATA CTTGCTCAAA TACCCTATGA CCCTGTAGAC AATCCTTATG CAAATGGTTA TATTCAGAAT CTAGTTCTAT TGCATGGTCG TATGACAGGT GATTGGATGA TTAAGATAAC CTGTCCTGGT AATCCAGGTA TGCAGTGTAG TATAGGTGTT GGATGGTCGC CAACAAAGAT TTCGGAAACA ACAGTACCCA TGGATGTTAT AACTAAGTAT GCTTTCTTCA CTACTGGTGT TTCATCAGAG TGGAGTCACA CCATAGTTAT GACTGATGCT AGACAAAACA ATTTCTATCG TACTATACAA CGCGACTCTA AGAAAACTCA AGTGGATGAC GTAGGAAACA TGCCGCATAT TGTGATATTT TGTGAAACTC CGCCAACCTC CGTTTATACA GAAAAGAAAA GCACATATCT AACTTTCTTT TCTAAATTGT GTAGTGAAAA TGATCTAATG TTTAATCCAT CTATAAAACC GTTCGTTTTG GCTGACCCTC AGCAGTCAGT TAAATATGAT GCAAGGAAAG GCTATTCTTT AAACTTCTAG CCCCGCAATT ATCACAAAGA TTGCGGGGAG CAAGCCTCGG TAATATATTT GGATTAGCTT ATACAGATTA TATATACTTA CATATAGAAG GTGACAAATT AACTGATTTA TTATTTCAAA ACGCTCTAAC TAATATCCCC GATTTCTCTA CAATTTCTTT GTTACAACAT GAAATATCTT CTACAGAAAG TGGTTATACC TTTCAGTTTT GTGATGCTGG TTATGCATCA TATTACCAAA ATAGTAGCCA TTTTGTATTG TTTCAATCCA ATTCCAATAA TTTCCTCCCA TTAATTAAAG ACTATAAAAA TAATGCAGAA TATGCCGATA TATCTAGAAC TATTTATGAT TGGTATAATC CTACTTATGA CGAGGATGAT TACTGTATCT TTTATAAAGT TGAACAAGTT AACAAGTTTT TCATTGAGAA ACCTGCGACT TGTGTGGCTC ATACAACATT TACTGGATCG AAAGCGGAAT GGATTTTTAC CCCAGAAGCC TTCGAAGTTG TAGAATTTAT AAAAGATAGA GTAAAATTCC GAGTTACCAA ATTACTTTTA CCAAAAACCC AGGAGAGAGA TATGAGCTTT AAAAATTTAA TATCATTTGA CTTGAATTAC CCAGCCATTA ATCAGATAGA GAAAGCATTA AATAATGTTA TACCCGCTAA TTTACCAAAG GGCATAAGAC AGATAGTGTT TTCTTCTTAT GCACAATTCT CTGTAAATAA TCCATATCGG GGTAGACAAA CTCCGCATAT AGCACCCATT TATTTATTTA TATCACGACT AAAACAACAA TATGGGTCAG AAACGGTGGA AATTATATTT AATAGTGCTT TTAACGGCCA ACAAGTTATT GCTGCTCGAA TTGATTTAAG CACAGCTGTT GAAAATACTT TTATATATAT TAAAACTGTT GATGAAGCTC CATTGTACTC AACGTTACGA TTTCCATCTG CTATGCTTGA GCTTTTAAGT ATACAGACGG TATACAAAGG AACAACACAA CCTTTTTCCG ACACAGATGA ATTTGACAGT AATGTTATAA TTGCTAATGC AGGTATGGCT GCTGCGTTTA TGGGTGGAGG TCTCCTGTCT GGATTAGGAC AGGGGATTGG CGCTTATGCA CAAGGCAAGA TGCAAATGCA GATGCAAGAT AAGACATTAT CTTGGTACGA GAAGAAGCAA ATGCATGATA TAGATAATCA ACGTTATCTA CAACAGTCAA TGTTTGATTG GAAATCACAT ATGCAAAACC GAGAATTTGA CTATGGAAAC GAACAACAAC GACGACAAAT TGACTGGCAG CGTAGCAGTC AAGCAGCTTT GTTCTCGCAA CAAAATCTGT ATCAGAATAC GCAAAATAAA TTTACTAAAG AGTTAGTTGA AACCAACTTG GATAGCGATA TACGAAGAGC ACGAAACGCT CAGCAACTAT CAGGTTATCG GACCGATGCG ACAGTTTCAG GGTTAACTAA TTCTGGAAGG GGTGGATTAG GCCACCCCGA TGCACCGCGC GGCGCAATAT TGCCACCACG TTCGGCTTCA ACACAAACTA ACTCACCTAA AGTTTACACA ACCAGACCAA CTGGATTTTA TACTGGACCA ATGTCTAGTA ATGACGATAA AATTTAATAA TATTTATTCA TTCTGTCAAT TAATGTTATT GATTAAGTTT TACTAAAACA TAACTATTAT TCTAAACTAA AATAACCATT TATACTTTTA TTCCATAACG TAGTATATAG ATTTATTTTA TTCTTTTATA ATGGGGACCA AATATAAATA AAGAACATAT ATTTTTATCT TATTTTAATA TATAGTTAAT GCAAAGCATA TTTTGGGCAA AATAAAAAAA AAAAAAAAAA AAAAA

Products

Productorf1a
DescriptionRNA-dependent RNA polymerase
MSLSKPSELE QVKPSSLWIT TYHTIKQLIK EWFTKLVEAV LNPGEIRIAI TAVVHTLTGV VLSTMTLFKK GTGYLMKIIS GVNLLSTFEL LLVQIGRNKE LFTPDSAMRH AESKLSEYLD HSDSEEVYAN TEQEAENIWV GCLSTILTTL FGALLAGFGL STKGLEGLTT TFRAATTTKN GVFCIKELVD AALKIIAEEK FDPVYKERKA ITALTEEAQV LLRLNLGAIA SDNKVKDRYR TIIKDINQAL TTYRHQDSAN MRSLLATMVG ELNKKLAEVE ALIPTRQVTA GVYLQGEKGV GKSSLCNYLA SYLAEVFDWS PSIYNISPGV KFYEPYLNED FGILNEFGST VDRDTFSVDA NRICSSDPFN FESAGLAGKV SMCQLKALFV TTNVLNPDIK ELQPNAVPAF WDRFIIIKVM DPLITDRRKQ VNHRKSDFSH LSFRVYDLGT DENDLPKFRL LYDKLHISDI LQILRTKLAL ETKAFYNRLN YPMPEALQKI IDLESNPPPG SYAFKYFGFQ EKIVENSGGR DFCILRLQGP EGTGKTTLAM KLAERWMELT TAFEGKSRYT IQKSSSLEEF VPLNTPTIYV LDDWVTSNIT IQESSIYVTK INATTNDSIF IITTNEIIKR RLPWCELPNR LLVGLLGGTY NYPYDMNPYK ELYSGMRRRI GLDDLYSVRG RVHDVSSTEY CMVVTTDEKS VLTCSGKNVG FPFIVESIKQ RFINMMENRY NITTIQGRPE NELPTVDFEI KVANKDILFK KLSTSLGAAS LYLKPDAEAS LYVSERIISG IAEVNPDKAI RPSDFICKEV FDDSIPTDER YTTIVERITR VLLQYFKDPT FRVVIQDEKR VVYSENGVVY YYEDKEDTRI AFEGYNLIIN LSTPKMVFPY DFAAALVEDR MEKKFVGTLS NLTAAEYTII EKYYKRSITS KKCNPFLVAV ATRELQLTRM KDPKYVKGLL KLQNNYLLKL GLCGLAGVGS VALLYGVYKL IASTMKQEEE KIKDNAFANV GSTPPKRAMN NQSNKDKQRL GATLTDPIIE NSPHHKHRGR IIPNKKRTSR YATTSTSSSS ETTTTSASSS DEITSDSDSS ISSDSSVKPE PITIVGNPAH RIIGNSAHTK NRGTIIPNNH TREIKRVDRA KKENEDYNKV PHEHVCTTCG CLFTHIHKFN KNFLHPTYQN ACPNYKCASY HGGNNKYNAK LIQADFINSA DEPLTPNAMT KLMGEEYAPV KVSLLEFFSA LPSEERKQVY DYINQARDAN DRTFARLCRK YPGLENCIMK AVHANMLTDA DMITNDDTDL EILHKKLNKA YVQVNYAGFR AYALHVGEGK FLTVAHCFDS VGRSLVLLSE GKSYPGVVVS ITRERDLSVV YCKELSNLRS AKSAFVKDSS DLVLGGYFMR CGPCVTIVSG NIEYREYQEF IDGSCSNEYY RPSMEVLKLR RVGLVVTETI RKGDCGFPFV ARINGTMRII GIHNAYKTHT VVFGAFISQP LIEELCSVVV PNADVPSTAV VVKVPVIRDD NYNDYLEMSM PMEYAEEFKK CFSPDPYMPK NSGLTSIGFN QKFRNYNHMK EKHFTHELTL ENANTCLPAA FSDRYVTDTS ELVKNGFGKP DPLWTQACKY GRRNKNYDRH IFRHAVEMAL DYNKMTYCAE KPFKFLTEFE ALNGRTEPFL SNVDITTSAG PYAKYFHNIY TKRDILDTEL ADGKPIYKFA QNRAGQSIRN HLKSQRNLLA VYGIPPCLIS QDNAKVENIE KEKAQKGKVR LFNNVDPAVN AILKIMFGDW FSRAMAKSSE GYYAIGQNPY TTSTEIWHRF STKQGKILNT DFKAFDKLLI TELIEAFCYI GGELTKNEKH PQSALMYEAI SLTLIHAVHI LNGSVYVVNN GNESGTFVTT LLNCVSVHII FNYSFIVCWN KVPSYVHIKP LLKDIMSRSE LAILGDDKTQ VVSKDIPMEE EDLIDIAASL GMECTKAKGG LDDGKQINFC SRVLVWDEVE QIVYPRLKKS SIIGLLYWFA SLDKNQVRDN LMIALFEASL HEREFYDSVL RDAMLVSLEF GVDIRTVAFT NYSQSRQRLK SMLMNDFEYQ QISALADRKT KESDYSDLIR ILKTAQLLEN DIQKAKTADI NNFSVVKNRA LAIQKYTTTS TTPTTGSVVY ESEMAPLSTN SNPISACLEL ISKLKTAGPV EHFERAGPPH SPTYSCTVTY AGRHFGGEGP SKASAKTQAY GALRQYLEDH IVCNAACEDQ RIEATQKIRK VAITAFSFYI ENHINTAINN ADGKKYIIII GKRSADDTVE QIDGFYKFHR GGNCYILSPI IEKLGRKTAA ECYRYYPGVS FDSSTNEVTL DVHASTSNYS LRDDFEKDYT DDDHLVFANS AEDKPILGVM ENDDPQTMPV TSVMDSDKAL YQPIIMNRSA PNNSWLRAGG ITFNIHDLVY NQFVGCNKQI TVGDGTAAGT ILAQIPYDPV DNPYANGYIQ NLVLLHGRMT GDWMIKITCP GNPGMQCSIG VGWSPTKISE TTVPMDVITK YAFFTTGVSS EWSHTIVMTD ARQNNFYRTI QRDSKKTQVD DVGNMPHIVI FCETPPTSVY TEKKSTYLTF FSKLCSENDL MFNPSIKPFV LADPQQSVKY DARKGYSLNF
Productorf1a-orf1b
Descriptionputative protease and RNA-dependent RNA polymerase
Modifications8154..8154:ribosomal_frameshift
MSLSKPSELE QVKPSSLWIT TYHTIKQLIK EWFTKLVEAV LNPGEIRIAI TAVVHTLTGV VLSTMTLFKK GTGYLMKIIS GVNLLSTFEL LLVQIGRNKE LFTPDSAMRH AESKLSEYLD HSDSEEVYAN TEQEAENIWV GCLSTILTTL FGALLAGFGL STKGLEGLTT TFRAATTTKN GVFCIKELVD AALKIIAEEK FDPVYKERKA ITALTEEAQV LLRLNLGAIA SDNKVKDRYR TIIKDINQAL TTYRHQDSAN MRSLLATMVG ELNKKLAEVE ALIPTRQVTA GVYLQGEKGV GKSSLCNYLA SYLAEVFDWS PSIYNISPGV KFYEPYLNED FGILNEFGST VDRDTFSVDA NRICSSDPFN FESAGLAGKV SMCQLKALFV TTNVLNPDIK ELQPNAVPAF WDRFIIIKVM DPLITDRRKQ VNHRKSDFSH LSFRVYDLGT DENDLPKFRL LYDKLHISDI LQILRTKLAL ETKAFYNRLN YPMPEALQKI IDLESNPPPG SYAFKYFGFQ EKIVENSGGR DFCILRLQGP EGTGKTTLAM KLAERWMELT TAFEGKSRYT IQKSSSLEEF VPLNTPTIYV LDDWVTSNIT IQESSIYVTK INATTNDSIF IITTNEIIKR RLPWCELPNR LLVGLLGGTY NYPYDMNPYK ELYSGMRRRI GLDDLYSVRG RVHDVSSTEY CMVVTTDEKS VLTCSGKNVG FPFIVESIKQ RFINMMENRY NITTIQGRPE NELPTVDFEI KVANKDILFK KLSTSLGAAS LYLKPDAEAS LYVSERIISG IAEVNPDKAI RPSDFICKEV FDDSIPTDER YTTIVERITR VLLQYFKDPT FRVVIQDEKR VVYSENGVVY YYEDKEDTRI AFEGYNLIIN LSTPKMVFPY DFAAALVEDR MEKKFVGTLS NLTAAEYTII EKYYKRSITS KKCNPFLVAV ATRELQLTRM KDPKYVKGLL KLQNNYLLKL GLCGLAGVGS VALLYGVYKL IASTMKQEEE KIKDNAFANV GSTPPKRAMN NQSNKDKQRL GATLTDPIIE NSPHHKHRGR IIPNKKRTSR YATTSTSSSS ETTTTSASSS DEITSDSDSS ISSDSSVKPE PITIVGNPAH RIIGNSAHTK NRGTIIPNNH TREIKRVDRA KKENEDYNKV PHEHVCTTCG CLFTHIHKFN KNFLHPTYQN ACPNYKCASY HGGNNKYNAK LIQADFINSA DEPLTPNAMT KLMGEEYAPV KVSLLEFFSA LPSEERKQVY DYINQARDAN DRTFARLCRK YPGLENCIMK AVHANMLTDA DMITNDDTDL EILHKKLNKA YVQVNYAGFR AYALHVGEGK FLTVAHCFDS VGRSLVLLSE GKSYPGVVVS ITRERDLSVV YCKELSNLRS AKSAFVKDSS DLVLGGYFMR CGPCVTIVSG NIEYREYQEF IDGSCSNEYY RPSMEVLKLR RVGLVVTETI RKGDCGFPFV ARINGTMRII GIHNAYKTHT VVFGAFISQP LIEELCSVVV PNADVPSTAV VVKVPVIRDD NYNDYLEMSM PMEYAEEFKK CFSPDPYMPK NSGLTSIGFN QKFRNYNHMK EKHFTHELTL ENANTCLPAA FSDRYVTDTS ELVKNGFGKP DPLWTQACKY GRRNKNYDRH IFRHAVEMAL DYNKMTYCAE KPFKFLTEFE ALNGRTEPFL SNVDITTSAG PYAKYFHNIY TKRDILDTEL ADGKPIYKFA QNRAGQSIRN HLKSQRNLLA VYGIPPCLIS QDNAKVENIE KEKAQKGKVR LFNNVDPAVN AILKIMFGDW FSRAMAKSSE GYYAIGQNPY TTSTEIWHRF STKQGKILNT DFKAFDKLLI TELIEAFCYI GGELTKNEKH PQSALMYEAI SLTLIHAVHI LNGSVYVVNN GNESGTFVTT LLNCVSVHII FNYSFIVCWN KVPSYVHIKP LLKDIMSRSE LAILGDDKTQ VVSKDIPMEE EDLIDIAASL GMECTKAKGG LDDGKQINFC SRVLVWDEVE QIVYPRLKKS SIIGLLYWFA SLDKNQVRDN LMIALFEASL HEREFYDSVL RDAMLVSLEF GVDIRTVAFT NYSQSRQRLK SMLMNDFEYQ QISALADRKT KESDYSDLIR ILKTAQLLEN DIQKAKTADI NNFSVVKNRA LAIQKYTTTS TTPTTGSVVY ESEMAPLSTN SNPISACLEL ISKLKTAGPV EHFERAGPPH SPTYSCTVTY AGRHFGGEGP SKASAKTQAY GALRQYLEDH IVCNAACEDQ RIEATQKIRK VAITAFSFYI ENHINTAINN ADGKKYIIII GKRSADDTVE QIDGFYKFHR GGNCYILSPI IEKLGRKTAA ECYRYYPGVS FDSSTNEVTL DVHASTSNYS LRDDFEKDYT DDDHLVFANS AEDKPILGVM ENDDPQTMPV TSVMDSDKAL YQPIIMNRSA PNNSWLRAGG ITFNIHDLVY NQFVGCNKQI TVGDGTAAGT ILAQIPYDPV DNPYANGYIQ NLVLLHGRMT GDWMIKITCP GNPGMQCSIG VGWSPTKISE TTVPMDVITK YAFFTTGVSS EWSHTIVMTD ARQNNFYRTI QRDSKKTQVD DVGNMPHIVI FCETPPTSVY TEKKSTYLTF FSKLCSENDL MFNPSIKPFV LADPQQSVKY DARKGYSLNL LAPQLSQRLR GASLGNIFGL AYTDYIYLHI EGDKLTDLLF QNALTNIPDF STISLLQHEI SSTESGYTFQ FCDAGYASYY QNSSHFVLFQ SNSNNFLPLI KDYKNNAEYA DISRTIYDWY NPTYDEDDYC IFYKVEQVNK FFIEKPATCV AHTTFTGSKA EWIFTPEAFE VVEFIKDRVK FRVTKLLLPK TQERDMSFKN LISFDLNYPA INQIEKALNN VIPANLPKGI RQIVFSSYAQ FSVNNPYRGR QTPHIAPIYL FISRLKQQYG SETVEIIFNS AFNGQQVIAA RIDLSTAVEN TFIYIKTVDE APLYSTLRFP SAMLELLSIQ TVYKGTTQPF SDTDEFDSNV IIANAGMAAA FMGGGLLSGL GQGIGAYAQG KMQMQMQDKT LSWYEKKQMH DIDNQRYLQQ SMFDWKSHMQ NREFDYGNEQ QRRQIDWQRS SQAALFSQQN LYQNTQNKFT KELVETNLDS DIRRARNAQQ LSGYRTDATV SGLTNSGRGG LGHPDAPRGA ILPPRSASTQ TNSPKVYTTR PTGFYTGPMS SNDDKI

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