Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201103"

Accession numberr201103 [export]
Locus namefdhA 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 3189 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 562)
DescriptionSelenocysteine incorporation at UGA codon
TTGCTTAGGG ATCTGCTCTC GCGCTGGCCG GTGGTACGAC AGATTCAAAA CAGAGATTGG AAGGCAACGG GCGAAACCGC GATGAGCGGA CAAACCCGCG ACTTGCGGGC TCGTAACGTT GGCGCCGAAG TCACGCGCTC GATCTGCCCG TATTGCGGCG TTGGCTGTGG TCAACTCGTC TTCCACAAAG ACAACGAGCT GATCAACATT GAGGGCGATC CCGATTCGCC GATCTCGCGC GGACGGCTCT GTCCAAAAGG CGCTGCAACG TACCAGCTAC ACACCGTGGA TTCGCGCCTA CTCAAAGTAA GGTATCGCCG ACCCTACGGC GCCGACTGGG AAGACCTTGA TCTCGAAACC GCAATGGACA TGGTTGCCGA TCGCCTGTGG GAATCGCGCG AGCGGTCGTT CGTCGAGAAG CAGGACGGCG AATGGGTGAT GCAGACGAAA GCCATCGGGC ATCTCGGCGG CGCAACGCTG GATAACGAAG AGAACTACCT GATCAAAAAA CTCTTCGCCG GAGGTCTGGG CATGGTTTGC GTGAGCAACC AGGCCCGTAT ATGACACAGC AGCACGGTGC CCGGTCTGGG CACCTCTTTT GGACGCGGCG GCGCCACCAC CGCGCAGCAA GACCTCGCGA ATGCGGACGC CATATTGATC ATGGGATCGA ACATGGCGGA GAACCATCCT GTTGGCTTCC AGTGGGTGAT TGAAGCCCGC GAGCGCGGAG GCAAGATCAT CCACGTTGAT CCGCGCTTCA CCCGCACCTC TGCGATGGCA GACGTGTGGG TGCCGTTCCG CGCCGGCAGC GACATCCTCT TTCTCGGCGG ACTGATTAAC TACGCCATCA CCCACGACAA GATCTTCCGC GACTATGTGG TGCATTACAC AAATGCTCCG GTGATCCTGC GCGACGACCT CAAGGACACC GAAGAAAACG ACGGTGTCTG GTCGGGCTGG GACGAGCAAG CCAAGAAATA CAACCCGGAA ACCTGGGCCT ACGCGGGTTC TCCTAAGAAA GATGCTGGCG GGGCCGCACC GGGACATCAG GAAGCAAGCG GCGGTCACGG CAAAGACCGC GGCGGCGAAG CAAGTACGAC CTCGCAGTAT CACGCCGATT ACACTCTCGA GCATCCGCGC TGCGTGTATC AAGTAATGAA GCGCCATTTC GCGCGCTACA CGCCGGAGTT TGTCGAAGAA CACTGCGGGG TTCCGCGCGA TCAGTTCCTT AAAGTTGCGG AGACATTCTG CAATGCGTCG GGTCCCGACA AGACGGCCGC CATCTGCTAT GCCGTCGGAT TCACCCAGCA CTCCAAGGGC GTGCAGATCA TCCGCACCGC GGCGATCCTG CAACTGCTAC TTGGGAACAT CGGTCGTCCT GGCGGCGGAA TCCTCGCGTT GCGAGGGCAT GCTTCCATCC AAGGCTCAAC CGATATCCCC ACACTTTACG ACATTCTTCC CGGCTACCTG CCGATGCCGT TCTTCGAGAA GGACGCTAAC GATTTCGCCA GCTACAACAA GAAGCACCGC AGTGAAACCG GCGTCTGGAG CAACTTCCCG AAGTTCAGCA CTAGCCTGCT CAAAGCCTGG TACGGCGAAC ACGCCACGAA CGAGAACGAC TACTGCTTCG ATTTGTTGCC GCGCGTAACG GGCGACCACT CGCACTTCGG CTACTGGCTC GATATGCAGG ACGGCAAGAT GGAAGGGCTC TTCATCATGG GCCAGAACCC CGCGGTCGGC GCATCGAATG GTCAGGTTGA GCGCACGGCG ATGTCGAAGC TGAAGTGGCT CGTCGTTCGC GACATGAGTG AGATCGAGAG CGCGACGTGG TGGAAGCGCG GGCCGGAAAT CGCTAGCGGC AAGTTGAAGA CCGAAGAAAT CGGTACCGAG ATTTTCCTCT TCCCTGCCGC CGGGACCGCG GAAAAAGCCG GATGTTTCAC CAACACCCAA CGCCTCGTCC AATACCGCGA GCAAGCCATC GAGCCTGCCG GTGATATCCG GAGCGAGCTC TGGTTCATGT ATCACCTCGG ACGCCGCCTT AAAGCAAAGG CCGAGGGTAA ACCAGGCAAA AAGTACGAGG CTCTCAACAA ACTCACCTGG GACTACTACA CTCACGGCGC GCAAGCCGAA CCCAGCGCCG ACCAAGTGCT ACAGGAAATC AATGGGCGCC ATATAGATAC TGGCAAGTTC GTTGCGCGGT ACCAGGAGTT AAAGGACGAC GGTTCGACCG CCAGCGGATG CTGGATCTAT GCCGGCGTTC ATCCGGACGA GCGCACGAAC CAGGCGAATG CTCGCGCCGC GACCAACTAC CTCGGCCATG GCTGGGGCTT CGCGTGGCCG AGCGATATCC GCATTCTGTA CAACCGCGCC TCGGCGCGAC CCGACGGTAA ACCGTGGAGC GAGCGCAAGA AACTCGTCTG GTGGGACGAC GAAAAGCAGG AGTGGACGGG CATTGATCAG CCCGACTTCG ACAAGAAGAA ACGGCCCGAC TACAAGCCAG GTCCTGGAGT TAAAGGAATA GATGGAATTC CAGGCGATAA ACCATTCATG CTACATCCAG ATGGCATGGG CTGGATTTGG GTGCCAAGCG GTCTGAAAGA CGGTCCGCTT CCCACCCACT ATGAGCCGCT GGAGTCGCAA TTCCGTAACC CGCTGTATCC CGGAAAGCAC GATTCCAATC CGCCGGCGGA CAAGAAGATC CGCCCCGACA ATCCTTACTC CAAATTTGGC GACGATCGCT ATCCTTTCGC GCTCACGACG TACCGCCTGA CCGAGCACCA CACTGCGGGT GGCATGTCCC GTACGCTGTC GTACCTTGCC GAACTGCAGC CTGAGTTGTT CTGCGAAGTG TCGCCCGAAC TCGCGGCGGA ACGCGGCCTG CGTCACGGTG ATTTCGCGAC GATCACCACG CCGCGTGCTA CCGTCGAGGC CCGCGTGCTC GTGACGCGAC GTATGCGGCC GCTGTGGGTG GAAGGCCGCA CCATTCACCA GATCGGTCTT CCCTATCACT GGGGCTACGA AGGCCTCGTG AAAGGCGACG TGACCAACGA TCTGCTGGCG ATCAGCGAAG AGCCGAACGT GCGCATCATG GAAACCAAAG CTTTAATCTG CGACATCGAA CCCGGACGAC GACCGCGCGG TGAAGCGGCG CCGGAATATG TTCGGGAGAA AGCCGAGCAG CCCGCATGA

Product

ProductfdhA 2
DescriptionfdhA 2
Modifications562..564,aa:Sec
LLRDLLSRWP VVRQIQNRDW KATGETAMSG QTRDLRARNV GAEVTRSICP YCGVGCGQLV FHKDNELINI EGDPDSPISR GRLCPKGAAT YQLHTVDSRL LKVRYRRPYG ADWEDLDLET AMDMVADRLW ESRERSFVEK QDGEWVMQTK AIGHLGGATL DNEENYLIKK LFAGGLGMVC VSNQARIUHS STVPGLGTSF GRGGATTAQQ DLANADAILI MGSNMAENHP VGFQWVIEAR ERGGKIIHVD PRFTRTSAMA DVWVPFRAGS DILFLGGLIN YAITHDKIFR DYVVHYTNAP VILRDDLKDT EENDGVWSGW DEQAKKYNPE TWAYAGSPKK DAGGAAPGHQ EASGGHGKDR GGEASTTSQY HADYTLEHPR CVYQVMKRHF ARYTPEFVEE HCGVPRDQFL KVAETFCNAS GPDKTAAICY AVGFTQHSKG VQIIRTAAIL QLLLGNIGRP GGGILALRGH ASIQGSTDIP TLYDILPGYL PMPFFEKDAN DFASYNKKHR SETGVWSNFP KFSTSLLKAW YGEHATNEND YCFDLLPRVT GDHSHFGYWL DMQDGKMEGL FIMGQNPAVG ASNGQVERTA MSKLKWLVVR DMSEIESATW WKRGPEIASG KLKTEEIGTE IFLFPAAGTA EKAGCFTNTQ RLVQYREQAI EPAGDIRSEL WFMYHLGRRL KAKAEGKPGK KYEALNKLTW DYYTHGAQAE PSADQVLQEI NGRHIDTGKF VARYQELKDD GSTASGCWIY AGVHPDERTN QANARAATNY LGHGWGFAWP SDIRILYNRA SARPDGKPWS ERKKLVWWDD EKQEWTGIDQ PDFDKKKRPD YKPGPGVKGI DGIPGDKPFM LHPDGMGWIW VPSGLKDGPL PTHYEPLESQ FRNPLYPGKH DSNPPADKKI RPDNPYSKFG DDRYPFALTT YRLTEHHTAG GMSRTLSYLA ELQPELFCEV SPELAAERGL RHGDFATITT PRATVEARVL VTRRMRPLWV EGRTIHQIGL PYHWGYEGLV KGDVTNDLLA ISEEPNVRIM ETKALICDIE PGRRPRGEAA PEYVREKAEQ PA