Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201104"

Accession numberr201104 [export]
Locus namefdhA 3
DescriptionfdhA 3
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 3234 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 580)
DescriptionSelenocysteine incorporation at UGA codon
ATGGGATTCA CCCGCAGAGA CTTCCTGAAA ACTGCCACTG TTGGCACAGC CGCATTACCG ATGCTCGGAT TCAGTACCGA GCAAGCTTAC GCGCAGGCAT CCGAGCTGAA AATCGCGCGC ACCACCGAGA CCCGCTCAAC TTGTCCATAC TGCGCGGTCA GTTGCGGTGT CATCATCCAC ACGATCGGCG ACAAGGCAAA GAATGTTACG CCGCAAGTGG TGCACGTCGA AGGTGACCCC GATCATCCCA TCAATCGAGG TACGCTCTGT CCTAAGGGCT CGTCTCTGAT GCAGGACATT CTCAACGAGC GCCGGCTGCT CAAACCGCAG GTTCGGCGTC CCGGTTCCGA TCACTGGGAA GACATCTCGT GGGACACGGC CTTCGAAGAA ATCGCGCAAA AGGTGAAGAA GACACGCGAC GACACCTTCA TTGAGAAGGA CCCGATGGGA CACACCGTCA ATCGTTGCCC CGGGATTGCA TTCACTGGCG GATGCACGGA CACCAACGAA TTCAATTTCC TCGTTGTGAA GACGATGAGA AGCATGGGGG TGACGTACCT GGAAAACCAG GCACGTGTTT GACACGGCCC AACGGTCTCA GGTCTGGGAC CAAGCTTCGG TCGCGGCGCG ATGACGAATG GCTGGGTAGA CATCAAGAAC ACCGACATGA TGTTGGTGAT GGGTGGCAAT CCAGCAGAAA ACCATCCATG CGGGTTTAAG TGGGCGATCG AAGCCAAGCG CACTCGAAAT GCCAAGTTGA TTGTCGTTGA CCCCAGATAC ACCCGAACTG CCGCGGTAAG CGACTTGTTC ATCCAATTAC GCGCGGGTAC GGATATTGCT TTGCTCGGTG CGTTTGTCAA CTACGCGCTG CAGAACGACC GCGTACACCA CGACTATCTC GTCAATTACA CAAACGCTGC GTTTATCGTG AAGGATGGTT TCAAGCTTCC CGAGGATGGA CTGTACTCCG GCTATGACGC GGAGAAACAT ACCTACGACA AGAGCACTTG GAATTACGAA GAGGGCGGCA ATTTAACGGG CAAGGCAGTG TCGGGAACCG CCGGGACTGG ACAACCGCCC GCGAAGGCGA ACATCGTTGC CGCTTCCGCA CACCCCGCAG AGCAGGCTCC CGCACAGCAT GGGATACCGG CAGCCGGTGC GACACTGCCG ACGTTGCCGC CGAACATTGC CTACGACACC TCGCTCCAGC ATCCGCGCTG CGTTTATCAA CTGCTGAAGA AACAGTATTC GCGCTACACG CCGGAGCTTG TCGAACGCAT TACCGGAATT CCGAAAGAAC AGATTGTGCA AGCTGCGGAC TTGTTTACTT CTGTACGCAA GAACGGCGAT CCGAGGCAAG TTGGCACCAT CATTTATGCC GTGGGGTGGA CCCAGCATAG CTCGGGAACA CAGACGATTC GTGCGGGCGC AATGCTGCAA CTCTTGCTCG GAAACATTGG GCGCGCTGGC GGCGGGATGA ACGCGTTACG TGGACACTCC AATATTCAAG GCGCTACCGA TATGGCCGGG ATTTTCGACA TTCTGCCGGG ATACCTGAAG GTTCCGACGC CTGCCGACGC CGATCTCACT GCTTATCTGA GTCGCACAAC CCCGAAGACC GCAAAGCCCA ATGAGTGGGC GTCGTTCAAC TATTGGTCAA ATACGCCGCG CTTCATGGTG TCGTTCTTGA AGTCGATGTA CGGCGACGCG GCGAAAAAAG AGAACGGGTT CGCATTCGAC TATCTGCCGA AGGTGGATCG CAACTATTCG TGGACTGAGA TTTGGGATGG GATGTATCGC GGGGAAGTGA AAGGCATTTT CGCGTTTGGC ATGAACGGCG TGATGATCGG CCCGAATAAT CAAAAGAACA TCAACGCGCT GAAGAAGGCC GACTGGCTGG TCGTATGCGA AATCTACCCT GACGAGACGA GCGAGTTCTG GAAATCTCCG GGAATTACTC CGGAGGAGAT GAAGTCGATC AACACGACTG TCTATCGTCT GCCGGGTGCC GGTTTCGCTG AGAAAGACGG CACGATGGTA AATTCGGCAC GCTGGCTGCA GTGGAAATGG GCCGCGGTGC CGCCTCCGGG AGACGCGAAA CTCGATCAGG AAATCTTGTC GCGAATCTTC CTGAATGTGC GGGACCTTTA CAAGGCGCAG GGCGGCAGAT TCCCGGATCC CATCCTGAAT GCTTCGTGGA ACTACACCAA CAAGCAGAAT CCGTCGCTCT CTGAAATTGC CAAAGAACTC AATGGCAAGG CGCTTGTGGA CGTGACGGAC GATGCTACGC AGACGACCAT CAAGGCCGGA CAGCAGTTGC CGGGCTTCGC TTTTCTCCGT GACGATGGTT CCACTACGAG CGGGAACTGG CTCTACTGCG GCTCGTGGAC GGAAGCCGGC GCGATGATGC AACGCCGCGG CACTGATGAT CCGTCGGGGC AGGGGATTTA TCAGAATTGG GCGTGGTCCT GGCCCGCCAA TCGCCGAGTG CTCTACAACC GCGCTTCGTG CGACGCGAAC GGCAAGCCTT GGGACGCATC TCGCAGCCAA GTGTGGTGGA ACGAGTCGTC GAAGAAGTGG GTTGGCAACG ATGTACCCGA CTTCAAGGCA GATTCGGTTC CGACGGAACA CATGGGGCCG TTCATCATGA ACCCGGAGGG CGTTGCTCGC CTGTTCGTTC CGCTTGGACA GGTTGCCGAC GGTCCATTCC CTGAGCATTA CGAGACTTTC GAGAGCCCAG TGAAAAACTT GCTGCACCCG CAGCAGAACA ATAATCCGGT AGCCAAGAAG TTCAAGAGTG ACCTCGACAA GTTCGGTACA CCCGAAGAAG GCTACAACAT CGTTTGTACG ACCTACCGCC TTACCGAGCA CTACCACTAC TGGACGAAGA ACAATCCAAT GAACGTTCAG TTGGTGCCGG AGCCGTTCGT CGAAATTCCG GCGGAACTTG CGAACGAGAT GGGCATCCGC GGCGGCGAGA AGGTGAAGAT CAGCAGCGCC AGAAATCATT ACATCGCCAA GGCCATGGTC ACCCGGCGCA TCCGCGGAAT GATGATTGAC GGCAAGAAGA CCTATCAGAT AGGAATCCCG ATCCATTGGG GATATCGAGG TATCCAGGAA GATGCTGGTC GGACCGCGCT AACGATGGTC AACGGTCTTA CCGCAGCCGT TATCGACCCC AACGCGTTCA CACCTGAATT CAAGGGTTTC CTCGTGAAAC TCGAGAAAGT CTAA

Product

ProductfdhA 3
DescriptionfdhA 3
Modifications580..582,aa:Sec
MGFTRRDFLK TATVGTAALP MLGFSTEQAY AQASELKIAR TTETRSTCPY CAVSCGVIIH TIGDKAKNVT PQVVHVEGDP DHPINRGTLC PKGSSLMQDI LNERRLLKPQ VRRPGSDHWE DISWDTAFEE IAQKVKKTRD DTFIEKDPMG HTVNRCPGIA FTGGCTDTNE FNFLVVKTMR SMGVTYLENQ ARVUHGPTVS GLGPSFGRGA MTNGWVDIKN TDMMLVMGGN PAENHPCGFK WAIEAKRTRN AKLIVVDPRY TRTAAVSDLF IQLRAGTDIA LLGAFVNYAL QNDRVHHDYL VNYTNAAFIV KDGFKLPEDG LYSGYDAEKH TYDKSTWNYE EGGNLTGKAV SGTAGTGQPP AKANIVAASA HPAEQAPAQH GIPAAGATLP TLPPNIAYDT SLQHPRCVYQ LLKKQYSRYT PELVERITGI PKEQIVQAAD LFTSVRKNGD PRQVGTIIYA VGWTQHSSGT QTIRAGAMLQ LLLGNIGRAG GGMNALRGHS NIQGATDMAG IFDILPGYLK VPTPADADLT AYLSRTTPKT AKPNEWASFN YWSNTPRFMV SFLKSMYGDA AKKENGFAFD YLPKVDRNYS WTEIWDGMYR GEVKGIFAFG MNGVMIGPNN QKNINALKKA DWLVVCEIYP DETSEFWKSP GITPEEMKSI NTTVYRLPGA GFAEKDGTMV NSARWLQWKW AAVPPPGDAK LDQEILSRIF LNVRDLYKAQ GGRFPDPILN ASWNYTNKQN PSLSEIAKEL NGKALVDVTD DATQTTIKAG QQLPGFAFLR DDGSTTSGNW LYCGSWTEAG AMMQRRGTDD PSGQGIYQNW AWSWPANRRV LYNRASCDAN GKPWDASRSQ VWWNESSKKW VGNDVPDFKA DSVPTEHMGP FIMNPEGVAR LFVPLGQVAD GPFPEHYETF ESPVKNLLHP QQNNNPVAKK FKSDLDKFGT PEEGYNIVCT TYRLTEHYHY WTKNNPMNVQ LVPEPFVEIP AELANEMGIR GGEKVKISSA RNHYIAKAMV TRRIRGMMID GKKTYQIGIP IHWGYRGIQE DAGRTALTMV NGLTAAVIDP NAFTPEFKGF LVKLEKV