Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201105"

Accession numberr201105 [export]
Locus nameDeiodinase-like
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 750 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 352)
DescriptionSelenocysteine incorporation at UGA codon
ATGAGCGAAA CCGAAGTTGC AGTTCCGAAG CAAGCGAAGA AGAGCCGCCG CCGCATGTGG CTGACGATCG CGTCCGTTGT GTTCGTCGCC TGGATTGGTT TCGTTTGCTA CATCAACTGG GCCATGCACC AGTCACCGGA AGTTTTCGGC AGCGTGATGA AACGCATGCC CATGCCCGCA TACTTCCTCT TCCCCTTCGA AACCATGTGG GGACGCGCGC GTCACGGCAC ACTCGAAGTC GGAAGCCATG CACCCGATTT CGACCTCGAA GCCTACGACA AGAGCGGACG CGTGCAACTC TCCAGCTTCC GCGGTAAACA ACCCGTTGTC CTCGTCTTCG GCAGCTACAC CTGACCGCCC TTCCGGCGGG AGGTTCCCGC CCTCAACAAG CTCGCGGAAA GCTATTCCGG CAAGGTCGCC TTCTACGCCG TCTACATTCT TGAAGCGCAC CCCACCGACG TTTGGCAGAT GCAGAGCAAC GTAAAAGACA ACGTGCTCTT CGCCAGCCCA AAGACGCTCG AAGAACGCGC CTCCGTTGCC GGAAGCTGCG TCCGCAAGCT TGGCATCAAG TTTCCTGCCG TCTTAGACGG CATCGACAAT ACGACCGAGA AGGCCTACAC CGGATGGCCT GACCGTCTCT ACCTCATCGA TCGCGACGGC AAAATCGCTT ACAAGAGCAG GCCCGGACCG TTCGGTTTCC ATCCAGACGA TTTGGAAAAA GCGCTCAAAA GCTTGCCTCC AACCGGCTAA

Product

ProductDeiodinase-like
DescriptionDeiodinase-like
Modifications352..354,aa:Sec
MSETEVAVPK QAKKSRRRMW LTIASVVFVA WIGFVCYINW AMHQSPEVFG SVMKRMPMPA YFLFPFETMW GRARHGTLEV GSHAPDFDLE AYDKSGRVQL SSFRGKQPVV LVFGSYTUPP FRREVPALNK LAESYSGKVA FYAVYILEAH PTDVWQMQSN VKDNVLFASP KTLEERASVA GSCVRKLGIK FPAVLDGIDN TTEKAYTGWP DRLYLIDRDG KIAYKSRPGP FGFHPDDLEK ALKSLPPTG